Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FREM3P0C091 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AL355379.1-201ENST00000405542 640 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 PTP4A1P5-201ENST00000420305 455 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 MTCO1P39-201ENST00000426148 480 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 RAB28P3-201ENST00000448325 597 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC003982.1-202ENST00000469928 248 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 RN7SL432P-201ENST00000484057 298 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC092185.1-201ENST00000491371 97 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC012170.1-201ENST00000495139 359 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 CBX3P5-201ENST00000552017 521 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.5□□□□□ -2.01
FREM3P0C091 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC123768.4-201ENST00000616244 701 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 MIR6733-201ENST00000635723 61 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC138393.1-206ENST00000540997 1886 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC109315.1-201ENST00000584143 1347 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC066616.2-201ENST00000559334 1481 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.5□□□□□ -2.01
FREM3P0C091 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.5□□□□□ -2.01
FREM3P0C091 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FREM3P0C091 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FREM3P0C091 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 RN7SKP284-201ENST00000411002 343 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC111000.5-201ENST00000506559 1178 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC111000.2-201ENST00000507775 550 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
FREM3P0C091 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.5□□□□□ -2.01
FREM3P0C091 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.5□□□□□ -2.01
FREM3P0C091 AC010653.1-201ENST00000571108 881 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 AC009039.2-201ENST00000624524 529 ntBASIC2.5□□□□□ -2.01
FREM3P0C091 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.5□□□□□ -2.01
FREM3P0C091 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.5□□□□□ -2.01
FREM3P0C091 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.5□□□□□ -2.01
FREM3P0C091 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.5□□□□□ -2.01
FREM3P0C091 EXOC5P1-201ENST00000510543 1969 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
FREM3P0C091 NDUFB4P5-201ENST00000415445 361 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.49□□□□□ -2.01
FREM3P0C091 AL049610.1-201ENST00000423374 372 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.49□□□□□ -2.01
FREM3P0C091 AC010683.1-201ENST00000473673 378 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 KC877373.1-201ENST00000479066 408 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.49□□□□□ -2.01
FREM3P0C091 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.49□□□□□ -2.01
FREM3P0C091 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
FREM3P0C091 AC243972.3-201ENST00000539655 198 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.49□□□□□ -2.01
FREM3P0C091 AL390838.2-201ENST00000602394 274 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 CR381653.2-201ENST00000624041 768 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 LRRC77P-213ENST00000637727 880 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
FREM3P0C091 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
FREM3P0C091 AC009487.2-201ENST00000420969 6821 ntBASIC2.49□□□□□ -2.01
FREM3P0C091 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.48□□□□□ -2.01
FREM3P0C091 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
FREM3P0C091 RNA5SP68-201ENST00000363885 119 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
FREM3P0C091 RPL31P52-201ENST00000407532 367 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 BMS1P22-201ENST00000414726 313 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.48□□□□□ -2.01
FREM3P0C091 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.48□□□□□ -2.01
FREM3P0C091 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.48□□□□□ -2.01
FREM3P0C091 RPL23AP92-201ENST00000603609 255 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AL592494.3-201ENST00000609485 464 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AL020991.1-201ENST00000612314 373 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AP004607.9-201ENST00000618202 316 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FREM3P0C091 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
FREM3P0C091 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.48□□□□□ -2.01
FREM3P0C091 RPS4XP8-201ENST00000402039 771 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.48□□□□□ -2.01
FREM3P0C091 AP000936.2-201ENST00000447151 681 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 SNRPGP5-201ENST00000456003 220 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 RPL21P18-201ENST00000469899 480 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AC087385.1-201ENST00000475062 312 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.48□□□□□ -2.01
FREM3P0C091 AC126121.1-201ENST00000482313 553 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 RNU6-347P-201ENST00000516658 105 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.48□□□□□ -2.01
FREM3P0C091 OR8L1P-201ENST00000534005 955 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AC009097.3-201ENST00000563557 1018 ntBASIC2.48□□□□□ -2.01
FREM3P0C091 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms