Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MTCYBP1-201ENST00000454315 1119 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 MTCO3P11-201ENST00000455103 774 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 AC010307.1-201ENST00000467206 836 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 AC109927.2-201ENST00000506416 303 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 AC090071.1-201ENST00000507713 644 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 RPL7L1P13-201ENST00000511702 739 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 TCP11X3P-202ENST00000514289 1254 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.17□□□□□ -1.58
SNRPA1P09661 AC004217.3-201ENST00000551552 878 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.17□□□□□ -1.58
SNRPA1P09661 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.17□□□□□ -1.58
SNRPA1P09661 AC108747.1-201ENST00000609508 535 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SNRPA1P09661 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 Z95327.2-201ENST00000414579 1873 ntBASIC5.17□□□□□ -1.58
SNRPA1P09661 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNRPA1P09661 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.17□□□□□ -1.58
SNRPA1P09661 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.17□□□□□ -1.58
SNRPA1P09661 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.17□□□□□ -1.58
SNRPA1P09661 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.16□□□□□ -1.58
SNRPA1P09661 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SNRPA1P09661 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNRPA1P09661 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNRPA1P09661 RNU4-44P-201ENST00000363050 141 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 Y_RNA.302-201ENST00000364997 102 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 RNA5SP372-201ENST00000390836 115 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.16□□□□□ -1.58
SNRPA1P09661 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AC018644.1-201ENST00000429934 551 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.16□□□□□ -1.58
SNRPA1P09661 LARP1BP3-201ENST00000437229 869 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AL139099.1-201ENST00000497398 403 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AC006499.5-201ENST00000505037 514 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.16□□□□□ -1.58
SNRPA1P09661 RN7SKP283-201ENST00000517197 270 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.16□□□□□ -1.58
SNRPA1P09661 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNRPA1P09661 OR6C7P-201ENST00000547875 934 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 EIF1P4-201ENST00000572664 335 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AC112230.1-201ENST00000604342 547 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AC092794.1-201ENST00000612734 582 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AC005332.6-201ENST00000613178 446 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AL160394.1-201ENST00000624765 724 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AC119744.1-201ENST00000454746 1715 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.16□□□□□ -1.58
SNRPA1P09661 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNRPA1P09661 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.16□□□□□ -1.58
SNRPA1P09661 Z82217.1-201ENST00000625157 8149 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 AC107982.1-201ENST00000507171 1300 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.16□□□□□ -1.58
SNRPA1P09661 AC096656.1-201ENST00000623826 1364 ntBASIC5.16□□□□□ -1.58
SNRPA1P09661 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNRPA1P09661 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNRPA1P09661 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SNRPA1P09661 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SNRPA1P09661 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNRPA1P09661 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNRPA1P09661 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SNRPA1P09661 Y_RNA.516-201ENST00000384541 124 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 SNORD116-23-201ENST00000384645 92 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 MIR670-201ENST00000390142 98 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.15□□□□□ -1.59
SNRPA1P09661 RPL23AP39-201ENST00000415533 405 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 BOLA3P4-201ENST00000418151 400 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 AL590609.2-201ENST00000421430 368 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 AL513175.1-201ENST00000431492 780 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 CBX1P4-201ENST00000439415 457 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 ST13P20-201ENST00000447996 1065 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 AL133547.1-201ENST00000448546 220 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 EPS15P1-201ENST00000448836 336 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 SUMO2P2-201ENST00000456482 255 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 ARPC3P2-201ENST00000457786 533 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 RPL23AP71-201ENST00000470966 469 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.15□□□□□ -1.59
SNRPA1P09661 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.15□□□□□ -1.59
SNRPA1P09661 RNA5SP179-201ENST00000517284 121 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 IGKV2-36-201ENST00000519999 223 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNRPA1P09661 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.15□□□□□ -1.59
SNRPA1P09661 YPEL5P3-201ENST00000547227 352 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 GTF2IP22-201ENST00000554443 182 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.15□□□□□ -1.59
SNRPA1P09661 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.15□□□□□ -1.59
SNRPA1P09661 AL451044.1-201ENST00000604867 238 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 RBM11P1-201ENST00000604951 799 ntBASIC5.15□□□□□ -1.59
SNRPA1P09661 AC024560.3-201ENST00000608482 349 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms