Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL1P09341 SNORD84-203ENST00000584275 78 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
CXCL1P09341 AC067959.1-201ENST00000604334 379 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AL162274.2-201ENST00000614406 332 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL1P09341 AC244258.1-201ENST00000637553 1071 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL1P09341 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CXCL1P09341 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL1P09341 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CXCL1P09341 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CXCL1P09341 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.29□□□□□ -2.04
CXCL1P09341 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CXCL1P09341 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CXCL1P09341 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CXCL1P09341 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 AL591034.1-201ENST00000407447 340 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 AL807761.1-201ENST00000417622 171 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 RFESDP1-201ENST00000422350 461 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.29□□□□□ -2.04
CXCL1P09341 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 MRPL50P4-201ENST00000446432 475 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC009961.3-201ENST00000449832 765 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC140076.1-201ENST00000449897 361 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 SBDSP1-204ENST00000453858 737 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 snoU13.24-201ENST00000458998 104 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC091959.2-201ENST00000477363 321 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 AC110794.1-201ENST00000505816 425 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.29□□□□□ -2.04
CXCL1P09341 RNU1-95P-201ENST00000516357 160 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 RNU1-128P-201ENST00000516704 160 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC090136.1-201ENST00000520009 240 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC239860.2-201ENST00000525886 270 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 AP003717.3-201ENST00000544832 1180 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 MTCO3P24-201ENST00000572729 782 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 CCDC58P3-201ENST00000590792 430 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 AC015849.2-201ENST00000605738 409 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 MIR6758-201ENST00000620653 63 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CXCL1P09341 AC010297.1-201ENST00000623948 149 ntBASIC2.29□□□□□ -2.04
CXCL1P09341 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL1P09341 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL1P09341 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL1P09341 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL1P09341 RNU1-35P-201ENST00000362782 153 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL1P09341 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL1P09341 SNORA5A-201ENST00000384111 134 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 MIR592-201ENST00000384959 97 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CXCL1P09341 MIR1250-201ENST00000408098 113 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 RN7SKP159-201ENST00000410657 292 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 RNA5SP492-201ENST00000411330 114 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 HMGN1P24-201ENST00000412282 298 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC109780.2-201ENST00000413467 845 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.28□□□□□ -2.04
CXCL1P09341 AL445528.1-201ENST00000426330 420 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 RPL21P110-201ENST00000433345 446 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC108734.1-201ENST00000439549 399 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.28□□□□□ -2.04
CXCL1P09341 AL627224.1-201ENST00000448334 444 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 TPT1P12-201ENST00000448968 492 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL1P09341 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.28□□□□□ -2.04
CXCL1P09341 SYPL1P1-201ENST00000473622 768 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC087879.1-201ENST00000474343 374 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL1P09341 ARL4AP2-201ENST00000507378 601 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 MTCYBP37-201ENST00000510642 1133 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 HMGN1P15-201ENST00000513870 295 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.28□□□□□ -2.04
CXCL1P09341 SNORA31.15-201ENST00000516771 132 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL1P09341 PAICSP4-201ENST00000517543 1253 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC025857.1-201ENST00000525252 377 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL1P09341 GTF2IP22-201ENST00000554443 182 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC034105.3-201ENST00000565294 442 ntBASIC2.28□□□□□ -2.04
CXCL1P09341 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.28□□□□□ -2.04
CXCL1P09341 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms