Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ARL5AP2-201ENST00000444698 533 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC4P09017 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 RPL37P6-202ENST00000464216 403 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 RPL23AP44-201ENST00000482216 473 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC4P09017 PHBP14-201ENST00000512887 367 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 MTCO3P27-201ENST00000514397 196 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 UBE2NP1-201ENST00000545592 458 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC093014.1-201ENST00000548926 724 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC233266.2-201ENST00000567067 528 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC4P09017 AC091057.3-201ENST00000602684 733 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC4P09017 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC4P09017 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC005156.1-201ENST00000613371 573 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 MIR7112-201ENST00000616126 65 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 MIR1264-201ENST00000616374 69 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 XIST_intron.1-201ENST00000619444 68 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 AC109809.1-201ENST00000619665 545 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
HOXC4P09017 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC4P09017 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC119744.1-201ENST00000454746 1715 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 AC138915.3-201ENST00000562908 1389 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXC4P09017 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXC4P09017 SNORA38.1-201ENST00000364172 131 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC4P09017 MIR184-201ENST00000384962 84 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 HMGB3P18-201ENST00000406327 590 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 VTA1P1-201ENST00000414044 866 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC4P09017 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC4P09017 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC4P09017 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC4P09017 MOB1AP2-201ENST00000446060 614 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 RPL12P26-201ENST00000452430 487 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AP000873.1-201ENST00000463987 400 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC4P09017 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC4P09017 CENPUP2-201ENST00000555897 1186 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC4P09017 YWHAZP1-201ENST00000556286 722 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC068620.3-201ENST00000602749 560 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 NTAN1P1-201ENST00000603150 646 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AL365503.1-201ENST00000605247 905 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC113194.1-201ENST00000606037 500 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC022079.2-201ENST00000619739 566 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC006065.5-201ENST00000623427 349 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC097520.1-201ENST00000624435 385 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC4P09017 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC4P09017 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
HOXC4P09017 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 AC073073.2-201ENST00000609827 2578 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC4P09017 AL133383.2-201ENST00000622958 2336 ntBASIC3.3□□□□□ -1.88
HOXC4P09017 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC4P09017 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
HOXC4P09017 MTCO1P4-201ENST00000520516 1409 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC006504.1-201ENST00000562493 3666 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC4P09017 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC4P09017 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC4P09017 MIR491-201ENST00000384877 84 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 TAF9BP2-201ENST00000400856 499 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms