Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.05□□□□□ -1.92
COL4A1P02462 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 MTND5P6-201ENST00000422338 1798 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 AC009487.4-201ENST00000624969 3585 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 U8.2-201ENST00000363156 134 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AL079342.1-201ENST00000401460 267 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A1P02462 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.04□□□□□ -1.92
COL4A1P02462 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 AL662791.1-201ENST00000441992 928 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AC021205.1-201ENST00000468797 348 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AC078785.3-201ENST00000476607 425 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 KLHL2P1-201ENST00000508691 521 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A1P02462 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.04□□□□□ -1.92
COL4A1P02462 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A1P02462 MTND5P12-201ENST00000502851 1449 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A1P02462 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL4A1P02462 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL4A1P02462 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
COL4A1P02462 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A1P02462 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
COL4A1P02462 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
COL4A1P02462 AL512430.2-201ENST00000406786 339 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AC069218.2-201ENST00000411665 344 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 ATG3P1-201ENST00000419507 911 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AC011816.1-201ENST00000441346 546 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A1P02462 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A1P02462 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A1P02462 AC008716.1-201ENST00000511084 513 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 Y_RNA.673-201ENST00000516306 88 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.04□□□□□ -1.92
COL4A1P02462 AC046143.2-201ENST00000609789 160 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AC107871.2-201ENST00000612894 502 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 MIR7843-201ENST00000622274 79 ntBASIC3.04□□□□□ -1.92
COL4A1P02462 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.04□□□□□ -1.92
COL4A1P02462 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A1P02462 AC090229.1-201ENST00000590983 1609 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A1P02462 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A1P02462 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A1P02462 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A1P02462 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
COL4A1P02462 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.03□□□□□ -1.92
COL4A1P02462 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A1P02462 AC005189.1-201ENST00000431286 310 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A1P02462 AC034244.2-201ENST00000514668 858 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 AC123904.3-201ENST00000547218 814 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 MIR4524B-201ENST00000581569 115 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 MIR7153-201ENST00000637758 57 ntBASIC3.03□□□□□ -1.92
COL4A1P02462 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
COL4A1P02462 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A1P02462 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL4A1P02462 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
COL4A1P02462 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.03□□□□□ -1.93
COL4A1P02462 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A1P02462 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A1P02462 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A1P02462 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.02□□□□□ -1.93
COL4A1P02462 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL4A1P02462 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 RNA5SP425-201ENST00000410336 112 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 RNU4-53P-201ENST00000410828 140 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 BX276092.3-201ENST00000424182 230 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
COL4A1P02462 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.02□□□□□ -1.93
COL4A1P02462 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A1P02462 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.02□□□□□ -1.93
COL4A1P02462 AC108471.1-201ENST00000513977 287 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A1P02462 AC009101.1-201ENST00000568135 242 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A1P02462 AC098826.3-201ENST00000603823 466 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 AC087468.1-201ENST00000604365 630 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A1P02462 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A1P02462 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A1P02462 OR4G1P-202ENST00000641173 1788 ntBASIC3.02□□□□□ -1.93
COL4A1P02462 MIR1289-2-201ENST00000408360 111 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A1P02462 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.01□□□□□ -1.93
COL4A1P02462 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A1P02462 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A1P02462 IGKV2-36-201ENST00000519999 223 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC061975.8-201ENST00000587058 721 ntBASIC3.01□□□□□ -1.93
COL4A1P02462 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A1P02462 AC025811.1-201ENST00000604312 472 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms