Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 MIR4504-201ENST00000577413 92 ntBASIC4□□□□□ -1.77
LDLRP01130 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AP001180.3-201ENST00000582221 145 ntBASIC4□□□□□ -1.77
LDLRP01130 NBR2-204ENST00000587322 63 ntBASIC4□□□□□ -1.77
LDLRP01130 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4□□□□□ -1.77
LDLRP01130 AC005255.1-201ENST00000593748 216 ntBASIC4□□□□□ -1.77
LDLRP01130 AL390838.2-201ENST00000602394 274 ntBASIC4□□□□□ -1.77
LDLRP01130 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4□□□□□ -1.77
LDLRP01130 AC008739.3-201ENST00000603262 127 ntBASIC4□□□□□ -1.77
LDLRP01130 AC121247.2-201ENST00000604776 136 ntBASIC4□□□□□ -1.77
LDLRP01130 AC131235.4-201ENST00000609288 620 ntBASIC4□□□□□ -1.77
LDLRP01130 AC099669.2-201ENST00000616549 437 ntBASIC4□□□□□ -1.77
LDLRP01130 AC069209.1-201ENST00000619282 651 ntBASIC4□□□□□ -1.77
LDLRP01130 MAPK10-373ENST00000641983 6772 ntBASIC4□□□□□ -1.77
LDLRP01130 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
LDLRP01130 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4□□□□□ -1.77
LDLRP01130 LARP1BP1-201ENST00000506036 1359 ntBASIC4□□□□□ -1.77
LDLRP01130 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4□□□□□ -1.77
LDLRP01130 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.99□□□□□ -1.77
LDLRP01130 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 DBF4P1-201ENST00000412976 1892 ntBASIC3.99□□□□□ -1.77
LDLRP01130 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.99□□□□□ -1.77
LDLRP01130 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LDLRP01130 RNU1-89P-201ENST00000384592 164 ntBASIC3.99□□□□□ -1.77
LDLRP01130 MIR124-3-201ENST00000384866 87 ntBASIC3.99□□□□□ -1.77
LDLRP01130 SNORA11.2-201ENST00000408318 127 ntBASIC3.99□□□□□ -1.77
LDLRP01130 BTF3L4P1-201ENST00000413813 468 ntBASIC3.99□□□□□ -1.77
LDLRP01130 RAC1P3-201ENST00000416129 580 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC092634.6-201ENST00000418558 192 ntBASIC3.99□□□□□ -1.77
LDLRP01130 TIMM9P2-201ENST00000419324 266 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AL390023.1-201ENST00000428836 262 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC007389.2-201ENST00000434630 306 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AL356535.1-201ENST00000440335 398 ntBASIC3.99□□□□□ -1.77
LDLRP01130 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 RPL21P89-201ENST00000444021 467 ntBASIC3.99□□□□□ -1.77
LDLRP01130 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 RPL21P134-201ENST00000453468 483 ntBASIC3.99□□□□□ -1.77
LDLRP01130 SNRPGP5-201ENST00000456003 220 ntBASIC3.99□□□□□ -1.77
LDLRP01130 ATG12P2-201ENST00000456830 416 ntBASIC3.99□□□□□ -1.77
LDLRP01130 snoU13.7-201ENST00000459220 104 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC053481.1-201ENST00000467217 306 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC069499.1-201ENST00000489433 509 ntBASIC3.99□□□□□ -1.77
LDLRP01130 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC109458.1-201ENST00000508858 316 ntBASIC3.99□□□□□ -1.77
LDLRP01130 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
LDLRP01130 OR5H4P-201ENST00000510851 923 ntBASIC3.99□□□□□ -1.77
LDLRP01130 OR5BM1P-201ENST00000512021 366 ntBASIC3.99□□□□□ -1.77
LDLRP01130 MRPS33P3-201ENST00000513456 322 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC108064.1-201ENST00000513791 460 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC117532.1-201ENST00000514638 323 ntBASIC3.99□□□□□ -1.77
LDLRP01130 SNORA3.4-201ENST00000515969 96 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.99□□□□□ -1.77
LDLRP01130 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AGGF1P8-201ENST00000562979 1000 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.99□□□□□ -1.77
LDLRP01130 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.99□□□□□ -1.77
LDLRP01130 AL133507.1-201ENST00000605269 557 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.99□□□□□ -1.77
LDLRP01130 AC128687.2-201ENST00000609657 566 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AC026368.1-201ENST00000614934 690 ntBASIC3.99□□□□□ -1.77
LDLRP01130 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 AC121761.2-201ENST00000617300 689 ntBASIC3.99□□□□□ -1.77
LDLRP01130 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 AC073348.1-201ENST00000623002 331 ntBASIC3.99□□□□□ -1.77
LDLRP01130 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 AC098679.5-201ENST00000624394 571 ntBASIC3.99□□□□□ -1.77
LDLRP01130 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 AC116618.1-201ENST00000634617 774 ntBASIC3.99□□□□□ -1.77
LDLRP01130 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
LDLRP01130 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
LDLRP01130 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.99□□□□□ -1.77
LDLRP01130 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LDLRP01130 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.98□□□□□ -1.77
LDLRP01130 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms