Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 AL356489.2-201ENST00000566968 3528 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CNOT4O95628 AL122126.1-201ENST00000546905 1318 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 RNA5SP183-201ENST00000362452 119 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 Y_RNA.58-201ENST00000362807 102 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RN7SKP115-201ENST00000363177 317 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 Y_RNA.154-201ENST00000363624 102 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RNY3P1-201ENST00000365085 102 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RNY3-201ENST00000365484 102 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 Y_RNA.490-201ENST00000384413 102 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 SNORA70E-201ENST00000384492 135 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 MIR649-201ENST00000384843 97 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CNOT4O95628 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RNA5SP487-201ENST00000410186 122 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RPL37P18-201ENST00000411602 243 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AC127391.1-201ENST00000411737 98 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 MTND2P23-201ENST00000422990 651 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 SAR1AP4-201ENST00000429225 591 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RPL7L1P9-201ENST00000431298 745 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 RPS3AP54-201ENST00000435535 734 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 MTCYBP6-201ENST00000441810 138 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.83□□□□□ -1.64
CNOT4O95628 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 RPS15AP17-201ENST00000470598 390 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 NDUFB5P1-201ENST00000508134 564 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 Vault.3-201ENST00000516676 95 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AC105029.1-201ENST00000520250 669 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 PHBP17-201ENST00000528576 541 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC034105.3-201ENST00000565294 442 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC005341.1-201ENST00000571086 708 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.83□□□□□ -1.64
CNOT4O95628 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.83□□□□□ -1.64
CNOT4O95628 AL162431.4-201ENST00000604674 411 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 AL365204.3-201ENST00000612448 685 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AL133173.2-201ENST00000614270 90 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 LINC00901.1-201ENST00000617252 152 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CNOT4O95628 ABCC13-202ENST00000463099 3842 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
CNOT4O95628 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CNOT4O95628 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNOT4O95628 LINC00622-201ENST00000562811 1570 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT4O95628 AP002907.1-201ENST00000606361 1430 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT4O95628 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT4O95628 Y_RNA.419-201ENST00000384041 102 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 Y_RNA.431-201ENST00000384086 102 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 RNU6-356P-201ENST00000384140 107 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 RPL7P25-201ENST00000404151 721 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 RN7SKP213-201ENST00000410746 298 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT4O95628 CYCSP10-201ENST00000417973 294 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 MTATP6P18-201ENST00000417994 673 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT4O95628 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.82□□□□□ -1.64
CNOT4O95628 AL365400.1-201ENST00000431854 640 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT4O95628 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CNOT4O95628 H2AFZP5-201ENST00000446960 382 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 GAPDHP25-201ENST00000447061 1001 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 PPIAP3-201ENST00000450588 505 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.82□□□□□ -1.64
CNOT4O95628 CEACAMP6-201ENST00000452007 574 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 AC007537.2-201ENST00000472093 511 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 RN7SL808P-201ENST00000496066 299 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.82□□□□□ -1.64
CNOT4O95628 AC104057.1-201ENST00000515547 497 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 RNU6-1045P-201ENST00000516321 107 ntBASIC4.82□□□□□ -1.64
CNOT4O95628 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms