Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.56□□□□□ -1.68
PHGDHO43175 NRBF2P3-201ENST00000432731 865 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.56□□□□□ -1.68
PHGDHO43175 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.56□□□□□ -1.68
PHGDHO43175 USP9YP28-201ENST00000435142 589 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 AC091862.1-201ENST00000438016 1100 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RPL22P17-201ENST00000438729 315 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 ELOCP30-201ENST00000447108 299 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 RPS20P32-201ENST00000456044 356 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 TPT1P7-201ENST00000458300 517 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 SNORD42A-201ENST00000459584 64 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 COX7A2P2-201ENST00000505291 250 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.56□□□□□ -1.68
PHGDHO43175 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 OR5M7P-201ENST00000526140 972 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC022878.1-201ENST00000530684 149 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.56□□□□□ -1.68
PHGDHO43175 AC044860.2-201ENST00000561005 179 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.56□□□□□ -1.68
PHGDHO43175 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.56□□□□□ -1.68
PHGDHO43175 RPL26P30-202ENST00000602923 645 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC112230.1-201ENST00000604342 547 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AL451044.1-201ENST00000604867 238 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC092354.2-201ENST00000607786 514 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC008250.2-201ENST00000615261 205 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC015540.1-201ENST00000615828 501 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 SNX18P1Y-201ENST00000616231 511 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 U73479.1-201ENST00000618062 168 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.56□□□□□ -1.68
PHGDHO43175 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.56□□□□□ -1.68
PHGDHO43175 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PHGDHO43175 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.56□□□□□ -1.68
PHGDHO43175 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PHGDHO43175 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PHGDHO43175 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PHGDHO43175 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PHGDHO43175 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.55□□□□□ -1.68
PHGDHO43175 RNU6-97P-201ENST00000363387 104 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RNU6-263P-201ENST00000363811 107 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RNU6-1042P-201ENST00000384204 107 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RNA5SP113-201ENST00000410486 84 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 MTCO1P21-201ENST00000416634 589 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AIMP1P1-201ENST00000418670 937 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 MTCYBP24-201ENST00000420387 1106 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 BRWD1P3-201ENST00000428816 390 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 ELOCP18-201ENST00000434209 337 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AL022238.1-201ENST00000442557 355 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 Z95327.1-201ENST00000446082 482 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 AC009963.2-201ENST00000453431 138 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.55□□□□□ -1.68
PHGDHO43175 ISCUP1-201ENST00000454451 448 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 snoU109.1-201ENST00000459339 135 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC146507.1-201ENST00000468335 354 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RPL7P16-201ENST00000479738 738 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.55□□□□□ -1.68
PHGDHO43175 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.55□□□□□ -1.68
PHGDHO43175 AC006390.1-201ENST00000508068 283 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 AC109464.2-201ENST00000510242 943 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 CDC42P4-201ENST00000510507 563 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 TMEM248P1-201ENST00000510579 951 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 PTGES3P3-201ENST00000511479 482 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RN7SKP276-201ENST00000516242 268 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RNU6-714P-201ENST00000516963 103 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 AP003392.2-201ENST00000527269 208 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 OR4P1P-201ENST00000530808 1136 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.55□□□□□ -1.68
PHGDHO43175 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.55□□□□□ -1.68
PHGDHO43175 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 BGLT3-201ENST00000564523 994 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC107954.1-201ENST00000565906 727 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.55□□□□□ -1.68
PHGDHO43175 ZNF415P1-201ENST00000582279 1166 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AL669831.4-202ENST00000590817 238 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC091805.2-201ENST00000603848 235 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AL031320.1-201ENST00000604177 357 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AC004853.1-201ENST00000604902 698 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 Z99129.1-201ENST00000612510 255 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms