Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 NSRP1P1-201ENST00000444067 1693 ntBASIC3.59□□□□□ -1.83
MSH4O15457 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.59□□□□□ -1.83
MSH4O15457 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
MSH4O15457 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.59□□□□□ -1.83
MSH4O15457 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
MSH4O15457 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.59□□□□□ -1.83
MSH4O15457 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
MSH4O15457 AP002784.2-201ENST00000397300 549 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.59□□□□□ -1.83
MSH4O15457 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.59□□□□□ -1.83
MSH4O15457 LIPT1P1-201ENST00000415870 1186 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AL353678.1-201ENST00000422735 741 ntBASIC3.59□□□□□ -1.83
MSH4O15457 MTCO2P1-201ENST00000424648 477 ntBASIC3.59□□□□□ -1.83
MSH4O15457 BX890604.2-201ENST00000427883 474 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AL512649.1-201ENST00000428997 581 ntBASIC3.59□□□□□ -1.83
MSH4O15457 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.59□□□□□ -1.83
MSH4O15457 MOB1AP2-201ENST00000446060 614 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AL096803.2-201ENST00000450032 677 ntBASIC3.59□□□□□ -1.83
MSH4O15457 BX248409.1-201ENST00000455497 255 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.59□□□□□ -1.83
MSH4O15457 HMGN1P18-201ENST00000457642 277 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
MSH4O15457 RPL21P103-201ENST00000479921 488 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.59□□□□□ -1.83
MSH4O15457 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.59□□□□□ -1.83
MSH4O15457 AC113192.3-201ENST00000529152 742 ntBASIC3.59□□□□□ -1.83
MSH4O15457 RN7SL622P-201ENST00000585292 275 ntBASIC3.59□□□□□ -1.83
MSH4O15457 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.59□□□□□ -1.83
MSH4O15457 Z82195.1-201ENST00000604558 398 ntBASIC3.59□□□□□ -1.83
MSH4O15457 RPL21P136-201ENST00000605378 396 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AC004943.3-201ENST00000624116 600 ntBASIC3.59□□□□□ -1.83
MSH4O15457 AL109659.3-201ENST00000624985 950 ntBASIC3.59□□□□□ -1.83
MSH4O15457 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
MSH4O15457 FAM157B-203ENST00000639350 358 ntBASIC3.59□□□□□ -1.83
MSH4O15457 MTND4P8-201ENST00000514997 1362 ntBASIC3.59□□□□□ -1.83
MSH4O15457 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.84
MSH4O15457 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MSH4O15457 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
MSH4O15457 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MSH4O15457 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MSH4O15457 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH4O15457 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.58□□□□□ -1.84
MSH4O15457 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH4O15457 SNORA7.4-201ENST00000384249 137 ntBASIC3.58□□□□□ -1.84
MSH4O15457 RNU6-272P-201ENST00000411028 104 ntBASIC3.58□□□□□ -1.84
MSH4O15457 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH4O15457 RPL7P53-201ENST00000421245 739 ntBASIC3.58□□□□□ -1.84
MSH4O15457 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH4O15457 YWHAZP8-201ENST00000436935 731 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC008379.1-201ENST00000463655 464 ntBASIC3.58□□□□□ -1.84
MSH4O15457 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.58□□□□□ -1.84
MSH4O15457 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC012170.1-201ENST00000495139 359 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH4O15457 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MSH4O15457 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH4O15457 USP9YP5-201ENST00000511770 630 ntBASIC3.58□□□□□ -1.84
MSH4O15457 RN7SKP277-201ENST00000516895 283 ntBASIC3.58□□□□□ -1.84
MSH4O15457 RNU6-334P-201ENST00000517072 102 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH4O15457 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH4O15457 AF279873.1-201ENST00000523393 313 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH4O15457 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.58□□□□□ -1.84
MSH4O15457 AC011611.5-201ENST00000552477 578 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH4O15457 AC023824.3-201ENST00000569003 562 ntBASIC3.58□□□□□ -1.84
MSH4O15457 UBL5P2-201ENST00000583788 219 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC008507.1-201ENST00000587506 734 ntBASIC3.58□□□□□ -1.84
MSH4O15457 VN1R88P-201ENST00000596787 292 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC008687.2-201ENST00000597865 520 ntBASIC3.58□□□□□ -1.84
MSH4O15457 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH4O15457 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
MSH4O15457 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
MSH4O15457 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.58□□□□□ -1.84
MSH4O15457 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MSH4O15457 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MSH4O15457 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH4O15457 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH4O15457 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH4O15457 SNORA70E-201ENST00000384492 135 ntBASIC3.57□□□□□ -1.84
MSH4O15457 GSTA8P-201ENST00000404253 637 ntBASIC3.57□□□□□ -1.84
MSH4O15457 RN7SKP285-201ENST00000410137 318 ntBASIC3.57□□□□□ -1.84
MSH4O15457 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.57□□□□□ -1.84
MSH4O15457 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.57□□□□□ -1.84
MSH4O15457 HMGB1P45-201ENST00000435986 653 ntBASIC3.57□□□□□ -1.84
MSH4O15457 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 ISCA1P2-201ENST00000438679 421 ntBASIC3.57□□□□□ -1.84
MSH4O15457 MTCO1P14-201ENST00000441695 1559 ntBASIC3.57□□□□□ -1.84
MSH4O15457 HSFY3P-201ENST00000444242 1191 ntBASIC3.57□□□□□ -1.84
MSH4O15457 AL929288.2-201ENST00000446368 407 ntBASIC3.57□□□□□ -1.84
MSH4O15457 AC005002.1-201ENST00000447458 540 ntBASIC3.57□□□□□ -1.84
MSH4O15457 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.57□□□□□ -1.84
MSH4O15457 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 GTF2IP12-201ENST00000456547 356 ntBASIC3.57□□□□□ -1.84
MSH4O15457 SNORD108-201ENST00000459332 71 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms