Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC243773.3-201ENST00000613270 256 ntBASIC3.85□□□□□ -1.79
TO15178 Z99129.2-201ENST00000619967 314 ntBASIC3.85□□□□□ -1.79
TO15178 AC008785.1-201ENST00000624475 456 ntBASIC3.85□□□□□ -1.79
TO15178 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.85□□□□□ -1.79
TO15178 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.85□□□□□ -1.79
TO15178 MIR6830-201ENST00000636015 70 ntBASIC3.85□□□□□ -1.79
TO15178 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.85□□□□□ -1.79
TO15178 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.85□□□□□ -1.79
TO15178 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TO15178 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TO15178 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TO15178 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.85□□□□□ -1.79
TO15178 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TO15178 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
TO15178 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 AC068538.1-201ENST00000376856 336 ntBASIC3.84□□□□□ -1.79
TO15178 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TO15178 RSL24D1P4-201ENST00000400938 484 ntBASIC3.84□□□□□ -1.79
TO15178 RN7SKP33-201ENST00000410942 340 ntBASIC3.84□□□□□ -1.79
TO15178 TPT1P2-201ENST00000413105 503 ntBASIC3.84□□□□□ -1.79
TO15178 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.84□□□□□ -1.79
TO15178 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.84□□□□□ -1.79
TO15178 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 C4BPAP2-201ENST00000428434 478 ntBASIC3.84□□□□□ -1.79
TO15178 RPL7P34-201ENST00000433316 712 ntBASIC3.84□□□□□ -1.79
TO15178 MTND1P26-201ENST00000440488 538 ntBASIC3.84□□□□□ -1.79
TO15178 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.84□□□□□ -1.79
TO15178 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 RSL24D1P3-201ENST00000449255 495 ntBASIC3.84□□□□□ -1.79
TO15178 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 RN7SL585P-201ENST00000470538 280 ntBASIC3.84□□□□□ -1.79
TO15178 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
TO15178 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.84□□□□□ -1.79
TO15178 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.84□□□□□ -1.79
TO15178 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 AC114981.1-201ENST00000503897 678 ntBASIC3.84□□□□□ -1.79
TO15178 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.84□□□□□ -1.79
TO15178 RNY4P37-201ENST00000516225 96 ntBASIC3.84□□□□□ -1.79
TO15178 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.84□□□□□ -1.79
TO15178 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 MRPS36P5-201ENST00000551909 298 ntBASIC3.84□□□□□ -1.79
TO15178 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 AC002400.1-201ENST00000569310 726 ntBASIC3.84□□□□□ -1.79
TO15178 AC022655.2-201ENST00000577280 318 ntBASIC3.84□□□□□ -1.79
TO15178 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 MIR4637-201ENST00000582405 84 ntBASIC3.84□□□□□ -1.79
TO15178 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
TO15178 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.84□□□□□ -1.79
TO15178 BNIP3P24-201ENST00000593398 557 ntBASIC3.84□□□□□ -1.79
TO15178 AC068313.1-201ENST00000604028 1008 ntBASIC3.84□□□□□ -1.79
TO15178 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 AC112220.3-201ENST00000605502 502 ntBASIC3.84□□□□□ -1.79
TO15178 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
TO15178 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.84□□□□□ -1.79
TO15178 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 AC083809.1-201ENST00000615051 472 ntBASIC3.84□□□□□ -1.79
TO15178 MIR7151-201ENST00000617477 60 ntBASIC3.84□□□□□ -1.79
TO15178 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.84□□□□□ -1.79
TO15178 MIR6758-201ENST00000620653 63 ntBASIC3.84□□□□□ -1.79
TO15178 AC131159.1-201ENST00000621854 213 ntBASIC3.84□□□□□ -1.79
TO15178 AP003485.2-201ENST00000623636 610 ntBASIC3.84□□□□□ -1.79
TO15178 AC019226.2-201ENST00000625973 424 ntBASIC3.84□□□□□ -1.79
TO15178 GDI2P1-201ENST00000429312 1336 ntBASIC3.84□□□□□ -1.79
TO15178 MTND4P34-201ENST00000572715 1371 ntBASIC3.84□□□□□ -1.79
TO15178 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TO15178 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.84□□□□□ -1.8
TO15178 ZNF734P-201ENST00000419494 1534 ntBASIC3.84□□□□□ -1.8
TO15178 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TO15178 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TO15178 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TO15178 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
TO15178 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.83□□□□□ -1.8
TO15178 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TO15178 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 RPL32P3-201ENST00000359025 275 ntBASIC3.83□□□□□ -1.8
TO15178 RNU6-931P-201ENST00000363850 107 ntBASIC3.83□□□□□ -1.8
TO15178 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.83□□□□□ -1.8
TO15178 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.83□□□□□ -1.8
TO15178 AC016769.3-201ENST00000396562 315 ntBASIC3.83□□□□□ -1.8
TO15178 ARF4P3-201ENST00000397387 509 ntBASIC3.83□□□□□ -1.8
TO15178 HSPE1P26-201ENST00000405341 275 ntBASIC3.83□□□□□ -1.8
TO15178 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.83□□□□□ -1.8
TO15178 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.83□□□□□ -1.8
TO15178 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms