Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 U1.39-201ENST00000621562 146 ntBASIC4.99□□□□□ -1.61
CUX2O14529 AC091903.1-201ENST00000624322 454 ntBASIC4.99□□□□□ -1.61
CUX2O14529 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 AC107021.2-201ENST00000567714 2095 ntBASIC4.98□□□□□ -1.61
CUX2O14529 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.98□□□□□ -1.61
CUX2O14529 RNA5SP21-201ENST00000410917 96 ntBASIC4.98□□□□□ -1.61
CUX2O14529 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.98□□□□□ -1.61
CUX2O14529 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 AC245517.4-201ENST00000448601 281 ntBASIC4.98□□□□□ -1.61
CUX2O14529 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 OR52A4P-203ENST00000498233 1014 ntBASIC4.98□□□□□ -1.61
CUX2O14529 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.98□□□□□ -1.61
CUX2O14529 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 AL592494.3-201ENST00000609485 464 ntBASIC4.98□□□□□ -1.61
CUX2O14529 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.98□□□□□ -1.61
CUX2O14529 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 AC026634.1-201ENST00000634369 198 ntBASIC4.98□□□□□ -1.61
CUX2O14529 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.98□□□□□ -1.61
CUX2O14529 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CUX2O14529 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CUX2O14529 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CUX2O14529 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CUX2O14529 AL445528.1-201ENST00000426330 420 ntBASIC4.97□□□□□ -1.61
CUX2O14529 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.97□□□□□ -1.61
CUX2O14529 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CUX2O14529 RPL31P20-201ENST00000449593 360 ntBASIC4.97□□□□□ -1.61
CUX2O14529 VWA8P1-201ENST00000510889 176 ntBASIC4.97□□□□□ -1.61
CUX2O14529 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.97□□□□□ -1.61
CUX2O14529 RNU6-1231P-201ENST00000517185 103 ntBASIC4.97□□□□□ -1.61
CUX2O14529 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.97□□□□□ -1.61
CUX2O14529 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.97□□□□□ -1.61
CUX2O14529 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.97□□□□□ -1.61
CUX2O14529 AC008507.1-201ENST00000587506 734 ntBASIC4.97□□□□□ -1.61
CUX2O14529 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.97□□□□□ -1.61
CUX2O14529 AC123768.4-201ENST00000616244 701 ntBASIC4.97□□□□□ -1.61
CUX2O14529 LINC00901.1-201ENST00000617252 152 ntBASIC4.97□□□□□ -1.61
CUX2O14529 PLCE1P1-201ENST00000622094 305 ntBASIC4.97□□□□□ -1.61
CUX2O14529 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CUX2O14529 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.97□□□□□ -1.61
CUX2O14529 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.97□□□□□ -1.61
CUX2O14529 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CUX2O14529 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.96□□□□□ -1.61
CUX2O14529 AC240504.1-201ENST00000395709 845 ntBASIC4.96□□□□□ -1.62
CUX2O14529 GTF2IP23-201ENST00000423746 351 ntBASIC4.96□□□□□ -1.62
CUX2O14529 AL513043.1-201ENST00000439124 535 ntBASIC4.96□□□□□ -1.62
CUX2O14529 NIPA2P5-201ENST00000452282 464 ntBASIC4.96□□□□□ -1.62
CUX2O14529 AC004801.2-202ENST00000463559 283 ntBASIC4.96□□□□□ -1.62
CUX2O14529 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.96□□□□□ -1.62
CUX2O14529 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.96□□□□□ -1.62
CUX2O14529 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.96□□□□□ -1.62
CUX2O14529 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.96□□□□□ -1.62
CUX2O14529 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.96□□□□□ -1.62
CUX2O14529 YWHAZP1-201ENST00000556286 722 ntBASIC4.96□□□□□ -1.62
CUX2O14529 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.96□□□□□ -1.62
CUX2O14529 AC015871.2-201ENST00000603605 948 ntBASIC4.96□□□□□ -1.62
CUX2O14529 AP000942.3-201ENST00000603702 160 ntBASIC4.96□□□□□ -1.62
CUX2O14529 AC009570.1-201ENST00000609599 745 ntBASIC4.96□□□□□ -1.62
CUX2O14529 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CUX2O14529 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CUX2O14529 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CUX2O14529 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CUX2O14529 RNA5SP289-201ENST00000362332 137 ntBASIC4.95□□□□□ -1.62
CUX2O14529 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.95□□□□□ -1.62
CUX2O14529 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.95□□□□□ -1.62
CUX2O14529 AC107015.1-201ENST00000466902 747 ntBASIC4.95□□□□□ -1.62
CUX2O14529 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.95□□□□□ -1.62
CUX2O14529 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CUX2O14529 TRAV11-201ENST00000539512 339 ntBASIC4.95□□□□□ -1.62
CUX2O14529 DNAJC19P3-201ENST00000594491 331 ntBASIC4.95□□□□□ -1.62
CUX2O14529 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.95□□□□□ -1.62
CUX2O14529 AL391597.1-201ENST00000618707 694 ntBASIC4.95□□□□□ -1.62
CUX2O14529 AC073476.4-201ENST00000628409 72 ntBASIC4.95□□□□□ -1.62
CUX2O14529 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.95□□□□□ -1.62
CUX2O14529 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.95□□□□□ -1.62
CUX2O14529 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CUX2O14529 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CUX2O14529 RLIMP2-201ENST00000427891 1563 ntBASIC4.95□□□□□ -1.62
CUX2O14529 AC092881.1-201ENST00000638218 2733 ntBASIC4.95□□□□□ -1.62
CUX2O14529 AC007342.9-201ENST00000623877 1385 ntBASIC4.95□□□□□ -1.62
CUX2O14529 SNORD114-1-201ENST00000362705 72 ntBASIC4.94□□□□□ -1.62
CUX2O14529 RNU6-249P-201ENST00000363016 102 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.94□□□□□ -1.62
CUX2O14529 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.94□□□□□ -1.62
CUX2O14529 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.94□□□□□ -1.62
CUX2O14529 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AC007566.2-201ENST00000603642 413 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AL365400.2-201ENST00000605604 902 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AC012213.4-201ENST00000606457 354 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AC004241.3-201ENST00000611728 517 ntBASIC4.94□□□□□ -1.62
CUX2O14529 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUX2O14529 RNU6-564P-201ENST00000410983 104 ntBASIC4.94□□□□□ -1.62
CUX2O14529 ISCA1P2-201ENST00000438679 421 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms