Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 S100A11P2-201ENST00000467589 312 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPS3AP14-201ENST00000483907 780 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL7P23-201ENST00000493874 747 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC104629.1-201ENST00000494226 508 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC108078.3-201ENST00000502633 489 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTCO2P9-201ENST00000503214 694 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNORA70.19-201ENST00000516717 90 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AP000916.1-201ENST00000533869 835 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC106782.4-201ENST00000568264 210 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 MIR4513-201ENST00000581077 86 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC011816.2-201ENST00000607089 556 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC011472.4-201ENST00000615848 491 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC145207.9-201ENST00000623802 325 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC080188.3-201ENST00000624842 748 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC106858.1-201ENST00000637497 429 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 SEPT7P7-201ENST00000420492 1301 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 OR5BR1P-201ENST00000524992 1330 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTND5P11-201ENST00000511037 1812 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNORA63.3-201ENST00000362682 132 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL22P22-201ENST00000395439 379 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPS27P5-201ENST00000444247 244 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL12P26-201ENST00000452430 487 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL32P14-201ENST00000463196 378 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC092451.1-201ENST00000480211 153 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC119751.5-201ENST00000514077 770 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU1-103P-201ENST00000516502 125 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 OSBPL9P3-201ENST00000534523 595 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL121594.4-201ENST00000556211 1196 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC120053.1-201ENST00000607706 736 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC123768.4-201ENST00000616244 701 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 GABPAP-201ENST00000419271 1356 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 MAPK10-362ENST00000641864 4484 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC002546.1-201ENST00000588041 2504 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC007496.3-201ENST00000624987 3443 ntBASIC3.22□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC008432.1-201ENST00000615912 1320 ntBASIC3.21□□□□□ -1.89
TMX2-CTNND1H3BSU7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
TMX2-CTNND1H3BSU7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.89
TMX2-CTNND1H3BSU7 AF127577.6-201ENST00000623352 2191 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL353746.1-201ENST00000566293 6881 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL035405.1-201ENST00000400795 710 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 SDR42E1P3-201ENST00000438345 502 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC009969.1-201ENST00000438726 172 ntBASIC3.21□□□□□ -1.9
TMX2-CTNND1H3BSU7 CBX1P4-201ENST00000439415 457 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms