Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 FABP5P3-201ENST00000437960 408 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 RPL21P23-201ENST00000446654 460 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 RPL26P28-201ENST00000451325 435 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 RN7SL75P-201ENST00000461926 281 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 RPL9P32-201ENST00000464118 620 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AP002812.1-201ENST00000495378 474 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 OR4U1P-201ENST00000554958 912 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AL049870.4-201ENST00000555741 486 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AL158211.1-201ENST00000566763 763 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC006270.2-201ENST00000578523 652 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 MIR4429-201ENST00000580105 73 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AL022067.1-201ENST00000602426 454 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC007687.1-201ENST00000602704 304 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC018754.1-201ENST00000607486 925 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC124016.2-201ENST00000610058 665 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AL392048.1-201ENST00000613946 534 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC243312.2-201ENST00000623340 601 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC015726.3-201ENST00000624501 418 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC083865.1-201ENST00000636634 831 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC012442.3-202ENST00000636742 206 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
TRIM49D1C9J1S8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.21□□□□□ -1.89
TRIM49D1C9J1S8 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 RNA5SP27-201ENST00000363839 119 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 RNU1-85P-201ENST00000364127 164 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 MIR23B-201ENST00000384832 97 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 HMGB1P13-201ENST00000406019 642 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 RAB9AP3-201ENST00000412737 573 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC241520.1-201ENST00000422654 1099 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 C1DP1-201ENST00000426049 402 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 ELOCP6-201ENST00000429066 328 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC092641.1-201ENST00000440229 772 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 RAB9AP1-201ENST00000449393 573 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 ELOCP12-201ENST00000458706 328 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 RNU7-140P-201ENST00000459546 60 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC113420.1-201ENST00000507903 571 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC010460.2-201ENST00000509054 677 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC091163.3-201ENST00000518269 1144 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC021451.1-201ENST00000523498 1129 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC118942.1-201ENST00000529674 1035 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 CYB5AP5-201ENST00000549779 389 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AGGF1P5-201ENST00000567900 919 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 ZNF92P3-201ENST00000596594 954 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 OR2BH1P-201ENST00000608850 864 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC096586.1-201ENST00000610267 561 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AL157817.1-201ENST00000614264 790 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC011472.4-201ENST00000615848 491 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM49D1C9J1S8 AL161912.2-201ENST00000565707 3007 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 MTCO1P18-201ENST00000455518 1419 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 RNA5SP167-201ENST00000365461 116 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 U6.112-201ENST00000384129 70 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 RNU6-1257P-201ENST00000384625 110 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms