Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 DHX9P1-201ENST00000436565 3076 ntBASIC4.72□□□□□ -1.65
CCDC78A2IDD5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.72□□□□□ -1.65
CCDC78A2IDD5 AL049555.1-201ENST00000562834 1933 ntBASIC4.72□□□□□ -1.65
CCDC78A2IDD5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC78A2IDD5 AC010928.1-201ENST00000592477 1447 ntBASIC4.72□□□□□ -1.65
CCDC78A2IDD5 AP001273.1-201ENST00000624493 3152 ntBASIC4.71□□□□□ -1.65
CCDC78A2IDD5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC78A2IDD5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AL590240.1-201ENST00000334118 313 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 Y_RNA.9-201ENST00000362354 101 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 RNU6-114P-201ENST00000384704 105 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AL591848.1-201ENST00000413092 322 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC245052.5-201ENST00000416320 649 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AL356583.2-201ENST00000426536 280 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC073614.1-201ENST00000438690 650 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 MTND4P25-201ENST00000441039 533 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC006463.2-201ENST00000473326 348 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC008897.1-201ENST00000494006 347 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC022447.3-201ENST00000506865 495 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC026412.2-201ENST00000512270 1075 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 RN7SKP276-201ENST00000516242 268 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 RNU1-6P-201ENST00000516290 144 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 RNU6-314P-201ENST00000516574 104 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 GSTP1P1-201ENST00000548078 319 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC090502.2-201ENST00000549267 280 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 HSPE1P3-201ENST00000559254 309 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 EIF5A2P1-201ENST00000564027 460 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC233280.2-201ENST00000603917 1070 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC112191.3-201ENST00000604371 277 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AL359535.1-201ENST00000612100 1087 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC138649.3-201ENST00000622154 254 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 MIR6810-201ENST00000622701 70 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC107081.3-201ENST00000612715 2034 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC006378.2-201ENST00000623178 2476 ntBASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC78A2IDD5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 SAGE2P-201ENST00000420011 2126 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 DSTNP4-201ENST00000399472 474 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 RNA5SP113-201ENST00000410486 84 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 BX890604.2-201ENST00000427883 474 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 USP9YP9-201ENST00000429406 715 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AC010881.1-201ENST00000433830 235 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 MRPL48P1-201ENST00000445390 636 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC78A2IDD5 MTCO1P27-201ENST00000448269 226 ntBASIC4.7□□□□□ -1.66
CCDC78A2IDD5 RPL39P6-201ENST00000448289 150 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms