Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RN7SL636P-201ENST00000497504 294 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AP003102.1-201ENST00000525638 661 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 VIS1.1-201ENST00000610517 203 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 Y_RNA.778-201ENST00000620203 90 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC091905.1-201ENST00000624400 311 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RNU6-356P-201ENST00000384140 107 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC096772.1-201ENST00000609146 564 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 U4.2-201ENST00000618561 85 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MIR6873-201ENST00000622788 63 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC126124.2-201ENST00000413542 321 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MOB1AP1-201ENST00000430903 535 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC009318.2-201ENST00000610917 651 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 uc_338.25-201ENST00000613756 156 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MTND4P22-201ENST00000413116 1169 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RPS6P2-201ENST00000454208 705 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 HMGB3P16-201ENST00000508037 287 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC234775.3-201ENST00000564612 656 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AL732372.2-225ENST00000642124 456 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC092326.2-201ENST00000624772 1561 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MTCO1P4-201ENST00000520516 1409 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 ZNF542P-204ENST00000482727 1305 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SNORA70.9-201ENST00000384370 135 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 PRELID3BP10-201ENST00000431957 584 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RPS20P1-201ENST00000434853 354 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC009238.1-201ENST00000442165 424 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC009237.6-201ENST00000446969 424 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 HMGB3P22-202ENST00000451823 572 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 RPL30P9-201ENST00000465586 330 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SETP1-201ENST00000556014 845 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 DNAJC19P6-201ENST00000401853 280 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SEPT7P8-201ENST00000413308 775 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 SULT1C2P1-202ENST00000562418 459 ntBASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.19□□□□□ -2.22
MACF1Q9UPN3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 AL117378.2-201ENST00000622916 1337 ntBASIC1.18□□□□□ -2.22
MACF1Q9UPN3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 AC084373.1-201ENST00000603311 235 ntBASIC1.18□□□□□ -2.22
MACF1Q9UPN3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 HSPA8P1-201ENST00000425843 1833 ntBASIC1.18□□□□□ -2.22
MACF1Q9UPN3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.18□□□□□ -2.22
MACF1Q9UPN3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms