Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORA57.3-201ENST00000411095 141 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 RN7SKP263-201ENST00000411194 309 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 RN7SKP53-201ENST00000411337 315 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC127526.1-201ENST00000417526 366 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SEPT7P5-201ENST00000434048 306 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC093155.1-201ENST00000440164 826 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL133217.1-201ENST00000450980 425 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 ANP32BP2-201ENST00000454525 545 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 PNPLA4P1-201ENST00000458328 305 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 ACTG1P13-201ENST00000486987 1043 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC026784.1-201ENST00000507986 352 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 OR5H4P-201ENST00000510851 923 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC109471.1-201ENST00000511631 612 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 RNA5SP135-201ENST00000517019 125 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 HIGD1AP6-201ENST00000521833 279 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC026333.2-201ENST00000542164 106 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 VN1R85P-201ENST00000601587 426 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL355816.1-201ENST00000607951 118 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL451074.6-201ENST00000608512 729 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 AC004777.1-201ENST00000624317 287 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 Z99496.1-201ENST00000469424 1477 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SIX2Q9NPC8 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.85□□□□□ -1.79
SIX2Q9NPC8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 RNA5SP502-201ENST00000362694 119 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 RNU6-1151P-201ENST00000384684 107 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 TMSB4XP8-201ENST00000402089 135 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 RNU6-272P-201ENST00000411028 104 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AL161449.1-201ENST00000414531 1199 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 TMSB4XP6-201ENST00000415187 135 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 PTP4A1P5-201ENST00000420305 455 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AL365338.1-201ENST00000422282 858 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 TMSB4XP1-201ENST00000424567 135 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 NPM1P24-201ENST00000428039 894 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 MTCO2P25-201ENST00000447065 681 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 RPL7P59-201ENST00000447700 943 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC002553.2-201ENST00000453217 340 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 RPL5P24-201ENST00000463742 885 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC104689.1-201ENST00000473356 768 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC146944.2-203ENST00000502493 354 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC104090.1-201ENST00000506341 1171 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC021146.1-201ENST00000511202 716 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC139495.1-202ENST00000513164 354 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 Y_RNA.688-201ENST00000516565 95 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AF279873.1-201ENST00000523393 313 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC005832.3-201ENST00000537929 631 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms