Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU6-77P-201ENST00000410554 91 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 RN7SKP159-201ENST00000410657 292 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 VN1R42P-201ENST00000424651 344 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 ELOCP3-201ENST00000439303 348 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 AC007967.1-201ENST00000455422 1159 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 OR5H5P-201ENST00000503164 928 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 MTCO3P44-201ENST00000510977 541 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 AC026402.1-201ENST00000513642 170 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 AC026616.1-201ENST00000523157 525 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 OR4A45P-201ENST00000529954 901 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 BNIP3P5-201ENST00000562290 498 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AL079305.1-201ENST00000623159 3008 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 MTND5P31-201ENST00000419366 1374 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 SNORD56.4-201ENST00000363883 71 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AL359837.1-201ENST00000381357 287 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 MIR554-201ENST00000384874 96 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 SOD2P1-201ENST00000396543 562 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC073508.1-201ENST00000428866 656 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC010285.1-201ENST00000470580 392 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC002456.2-201ENST00000509356 380 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 SNORA31.20-201ENST00000517111 133 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 OR4T1P-201ENST00000554933 911 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AL845331.3-202ENST00000562856 261 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC106785.1-201ENST00000565935 262 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 OR4H6P-202ENST00000603819 340 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 HSPE1P14-201ENST00000605812 302 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC005972.3-201ENST00000606304 481 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC016877.3-201ENST00000606778 504 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AL354976.1-201ENST00000613843 387 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 RMST_10.1-201ENST00000616309 154 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC069209.1-201ENST00000619282 651 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC006213.5-201ENST00000619673 288 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC073055.1-201ENST00000456901 1621 ntBASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CCNB1IP1Q9NPC3 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 RPL31P1-201ENST00000398116 372 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 NPM1P10-201ENST00000398310 865 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC007899.1-201ENST00000412776 775 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 UBE2V1P9-201ENST00000414760 368 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AL356968.1-201ENST00000416622 474 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AL035423.1-201ENST00000420331 213 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC245054.1-201ENST00000420944 258 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC096632.1-201ENST00000427395 310 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC006548.1-201ENST00000427470 102 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AL035246.1-201ENST00000433554 1255 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 RSL24D1P8-201ENST00000434442 492 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 NECAP1P2-201ENST00000455668 727 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC091564.1-201ENST00000464563 479 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 RN7SKP18-201ENST00000516005 275 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 SNORA76.2-201ENST00000517095 137 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 IGJP1-201ENST00000522682 475 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 OR8K4P-201ENST00000534608 872 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms