Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 AC244517.1-201ENST00000606030 2086 ntBASIC4.09□□□□□ -1.76
BRF2Q9HAW0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
BRF2Q9HAW0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RNA5SP258-201ENST00000362750 119 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RNA5SP189-201ENST00000364920 115 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RNU6-398P-201ENST00000384143 109 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RNA5SP332-201ENST00000391063 115 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 DHFRP6-201ENST00000401776 268 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RPS4XP9-201ENST00000405151 780 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 PIGPP2-201ENST00000411569 458 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 TPMTP2-201ENST00000414372 726 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 MTCO3P12-201ENST00000416718 547 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL365203.2-201ENST00000423444 196 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 ZYG11AP1-201ENST00000430329 837 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RPL23AP89-201ENST00000439324 255 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL606662.1-201ENST00000445763 553 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL445669.2-201ENST00000454425 421 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 NDUFA5P9-201ENST00000472609 340 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 BZW1P2-201ENST00000473537 826 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 ST13P14-201ENST00000474095 734 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 BET1P1-201ENST00000482276 359 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC025445.1-201ENST00000502728 300 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC006390.1-201ENST00000508068 283 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 RNU6-232P-201ENST00000517144 64 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC090281.1-201ENST00000523019 276 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC024224.1-201ENST00000538284 609 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC012435.1-202ENST00000568772 240 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SNORD84-203ENST00000584275 78 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL109653.1-201ENST00000603091 248 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AL356121.2-201ENST00000624715 780 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC007671.2-201ENST00000637344 619 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 AC008013.2-202ENST00000637965 364 ntBASIC4.08□□□□□ -1.76
BRF2Q9HAW0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRF2Q9HAW0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 AL391994.1-201ENST00000254724 282 ntBASIC4.07□□□□□ -1.76
BRF2Q9HAW0 RPL21P132-201ENST00000331267 462 ntBASIC4.07□□□□□ -1.76
BRF2Q9HAW0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 OR5H2-201ENST00000355273 945 ntBASIC4.07□□□□□ -1.76
BRF2Q9HAW0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 RNA5SP388-201ENST00000362584 119 ntBASIC4.07□□□□□ -1.76
BRF2Q9HAW0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 CYCSP45-201ENST00000402289 315 ntBASIC4.07□□□□□ -1.76
BRF2Q9HAW0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.07□□□□□ -1.76
BRF2Q9HAW0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms