Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC135507.2-201ENST00000612443 309 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC243773.3-201ENST00000613270 256 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AL442067.2-201ENST00000614033 363 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC006504.8-201ENST00000621046 635 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AC019278.1-201ENST00000623516 479 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 AL672167.1-203ENST00000641299 2975 ntBASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
BCAS3Q9H6U6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC010266.2-201ENST00000564741 3255 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RPL32P3-201ENST00000359025 275 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 Y_RNA.142-201ENST00000363491 102 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 Y_RNA.460-201ENST00000384255 102 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 Y_RNA.529-201ENST00000384586 119 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 MIR659-201ENST00000384963 97 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC104297.1-201ENST00000393779 870 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RNU6-272P-201ENST00000411028 104 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 BTF3L4P3-201ENST00000418879 476 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 USP9YP36-201ENST00000424581 829 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AL451139.1-201ENST00000434718 346 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 SNRPEP7-201ENST00000438350 220 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 ARL2BPP10-201ENST00000446487 531 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RPL23AP20-201ENST00000447965 421 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 Z82190.1-201ENST00000454534 490 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 OR6K1P-201ENST00000456766 971 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 MEMO1P3-201ENST00000459811 302 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC114967.1-201ENST00000504890 259 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RNU6-1153P-201ENST00000516760 105 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 RN7SKP283-201ENST00000517197 270 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC125611.2-201ENST00000551907 647 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC022432.1-201ENST00000595739 310 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC011816.2-201ENST00000607089 556 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 CDRT1-208ENST00000630868 794 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC097063.1-201ENST00000426714 1797 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC112198.2-201ENST00000426589 6996 ntBASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.31□□□□□ -1.56
BCAS3Q9H6U6 AC026523.2-201ENST00000625039 7739 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 RNU6-809P-201ENST00000384461 107 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 FAT1P1-201ENST00000406588 507 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MIR1302-11-201ENST00000408051 138 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MIR1302-9-201ENST00000408365 138 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MIR1302-10-201ENST00000408734 138 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MTND3P17-201ENST00000416968 344 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 E2F6P2-201ENST00000420708 748 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AF228730.4-201ENST00000421457 183 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AL445669.1-201ENST00000426743 755 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 NANOGP6-201ENST00000429190 847 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC092162.1-201ENST00000432828 434 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms