Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU5A-8P-201ENST00000364102 114 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 RN7SKP153-201ENST00000365026 316 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 MTND2P24-201ENST00000453434 806 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 snoU13.3-201ENST00000459441 104 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 RNA5SP103-201ENST00000459503 118 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC023194.1-201ENST00000493084 308 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AK3P4-201ENST00000504283 583 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC024558.1-201ENST00000505008 528 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 RNA5SP337-201ENST00000517007 109 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 NRBF2P4-201ENST00000520874 850 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 KC877982.1-201ENST00000602313 470 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC112230.1-201ENST00000604342 547 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AL512329.2-201ENST00000607350 548 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 uc_338.12-201ENST00000616344 181 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AL356585.4-201ENST00000623078 1229 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AC073869.10-201ENST00000642016 354 ntBASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM55Q9BYV6 AL138713.1-201ENST00000624026 2130 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 THAP12P4-201ENST00000528321 2266 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 RNA5SP319-201ENST00000362768 119 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 RNY4P14-201ENST00000363656 96 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 Y_RNA.402-201ENST00000383972 102 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 RPL7P60-201ENST00000397636 735 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 ELOCP4-201ENST00000420090 333 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC009480.2-201ENST00000422916 432 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AL139148.1-201ENST00000427122 680 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 ELOCP14-201ENST00000428070 331 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 RPL34P6-201ENST00000432390 345 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 ELOCP7-201ENST00000439968 331 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 RPS17P13-201ENST00000448974 407 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 RN7SL346P-201ENST00000491561 294 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC021146.1-201ENST00000511202 716 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 CR383656.7-201ENST00000548164 174 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 MRPS21P7-201ENST00000566937 238 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AP005403.1-201ENST00000579720 229 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 COX6CP3-201ENST00000580869 223 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC024940.4-201ENST00000605507 246 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AL136295.6-201ENST00000610486 658 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 MIR6837-201ENST00000620884 64 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 AC090229.1-201ENST00000590983 1609 ntBASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM55Q9BYV6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AL672167.1-204ENST00000641875 3017 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms