Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SKP62-201ENST00000384539 329 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AL513475.1-201ENST00000406602 315 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 MIR1204-201ENST00000408388 67 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 RN7SKP91-201ENST00000410852 288 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 RPL31P2-201ENST00000413849 377 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AKR1B10P1-201ENST00000425765 942 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AL356121.1-201ENST00000442911 156 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AL596266.1-201ENST00000448132 400 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AL034399.1-201ENST00000451535 380 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 RN7SL88P-201ENST00000480166 299 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 RN7SL612P-201ENST00000497704 295 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 RPS4XP20-201ENST00000505751 772 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC103783.1-201ENST00000520506 373 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC131935.1-201ENST00000524621 333 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC024405.2-202ENST00000532731 184 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 ACTG1P15-201ENST00000570019 1063 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 MIR5701-3-201ENST00000578890 82 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 RN7SL32P-201ENST00000580514 281 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 MIR5701-1-201ENST00000585138 82 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AL034351.1-201ENST00000605288 668 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 MIR5701-2-201ENST00000615634 82 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 MIR376A1-201ENST00000616574 68 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC244100.4-201ENST00000617747 388 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC000374.1-201ENST00000434698 1745 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USB1Q9BQ65 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USB1Q9BQ65 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USB1Q9BQ65 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 SAGE4P-201ENST00000442271 3381 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USB1Q9BQ65 Y_RNA.16-201ENST00000362421 102 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 RNU6-288P-201ENST00000363690 104 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 RNU6-704P-201ENST00000364162 103 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USB1Q9BQ65 LDHAP5-201ENST00000394996 622 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AL157702.1-201ENST00000398764 426 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AL109941.1-201ENST00000401925 229 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USB1Q9BQ65 COX6CP10-201ENST00000416832 224 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 GOT2P2-201ENST00000450663 1251 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC087190.1-201ENST00000484462 480 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC107032.1-201ENST00000485945 480 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 RN7SL350P-201ENST00000492591 299 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 RPL23AP80-201ENST00000495605 424 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC114324.2-202ENST00000503812 134 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC087369.1-201ENST00000520775 996 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC007537.1-201ENST00000539347 327 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 IGLJCOR18-201ENST00000584002 424 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC006329.2-201ENST00000611491 394 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 MIR7854-201ENST00000620068 65 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC021753.1-201ENST00000635724 168 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 ZNF299P-201ENST00000406845 1804 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC079178.2-201ENST00000439323 1624 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 SAGE3P-201ENST00000619800 1635 ntBASIC6.1□□□□□ -1.43
USB1Q9BQ65 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.1□□□□□ -1.43
USB1Q9BQ65 AC005183.1-201ENST00000603687 1979 ntBASIC6.09□□□□□ -1.43
USB1Q9BQ65 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.09□□□□□ -1.43
USB1Q9BQ65 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
USB1Q9BQ65 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USB1Q9BQ65 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USB1Q9BQ65 Y_RNA.27-201ENST00000362540 103 ntBASIC6.09□□□□□ -1.43
USB1Q9BQ65 Y_RNA.170-201ENST00000363746 110 ntBASIC6.09□□□□□ -1.43
USB1Q9BQ65 RN7SKP250-201ENST00000363924 321 ntBASIC6.09□□□□□ -1.43
USB1Q9BQ65 RN7SKP186-201ENST00000365371 303 ntBASIC6.09□□□□□ -1.43
USB1Q9BQ65 RNU6-14P-201ENST00000384630 106 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms