Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 SNRPEP3-201ENST00000338402 276 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 RNA5SP447-201ENST00000363749 119 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 SNORD82-201ENST00000365530 70 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 SNORD116.1-201ENST00000365628 92 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AL121972.1-201ENST00000402023 252 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AL590139.1-201ENST00000416267 400 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 P2RY10P2-201ENST00000416730 913 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AL513174.1-201ENST00000423182 629 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC084290.1-201ENST00000434995 374 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 VN1R10P-201ENST00000447106 875 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 NDUFA12P1-201ENST00000455914 406 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 RPL36AP13-201ENST00000457490 317 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC092757.1-201ENST00000467293 467 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 RN7SL738P-201ENST00000470264 297 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC092593.2-201ENST00000513866 913 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC105233.3-201ENST00000531125 744 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 SLC2A13P1-201ENST00000531560 322 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 PDCL2P2-201ENST00000533651 189 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC068831.4-201ENST00000556118 109 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC099489.2-201ENST00000574976 260 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 MIR4715-201ENST00000584117 79 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 SNRPGP15-201ENST00000600149 222 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC009159.2-201ENST00000617603 606 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC092184.1-201ENST00000625042 715 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC090897.3-201ENST00000636973 1157 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RFT1Q96AA3 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFT1Q96AA3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 SNORD35B-201ENST00000363660 87 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 RNU6-263P-201ENST00000363811 107 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 RNU6-621P-201ENST00000364752 109 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFT1Q96AA3 RNU6-636P-201ENST00000384598 107 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 U3.29-201ENST00000391296 212 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 CYB5AP4-201ENST00000396692 399 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 ATP5F1P4-201ENST00000397288 746 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 EI24P2-201ENST00000397776 1076 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AL133270.1-201ENST00000402635 279 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AL583834.1-201ENST00000406943 343 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC068533.2-201ENST00000411872 306 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 RPS29P17-201ENST00000430795 166 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 MTND1P31-201ENST00000449206 961 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 DNAJC19P1-201ENST00000455312 319 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 PLGLA-201ENST00000465668 449 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 RPL35P6-201ENST00000490024 372 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 RN7SL691P-201ENST00000494487 301 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC108941.1-201ENST00000502853 530 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 MTCYBP35-201ENST00000503630 1137 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC093824.1-201ENST00000508796 343 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC034205.1-201ENST00000520621 638 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 OR5D17P-201ENST00000531492 978 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 LRRC34P1-201ENST00000542742 915 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC090695.1-201ENST00000561269 1222 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 ZNF192P1-203ENST00000565888 810 ntBASIC3.54□□□□□ -1.84
RFT1Q96AA3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms