Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.28□□□□□ -1.88
UBE2E3Q969T4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBE2E3Q969T4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.28□□□□□ -1.88
UBE2E3Q969T4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.28□□□□□ -1.89
UBE2E3Q969T4 PRO1804-201ENST00000623780 2050 ntBASIC3.28□□□□□ -1.89
UBE2E3Q969T4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 Y_RNA.126-201ENST00000363382 111 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RNU6-619P-201ENST00000365146 108 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 OR1L1-202ENST00000373686 1083 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RNU6-207P-201ENST00000384137 107 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RNU6-549P-201ENST00000384433 107 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 MIR200C-201ENST00000384980 68 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 PTMAP2-201ENST00000397627 327 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AL121972.1-201ENST00000402023 252 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 GSTA8P-201ENST00000404253 637 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC012065.2-201ENST00000421295 375 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RPL21P112-201ENST00000434403 463 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 HMGN2P7-201ENST00000456186 273 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RN7SL542P-201ENST00000467147 294 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RPS17P11-201ENST00000474297 293 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 TMED11P-201ENST00000479478 690 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AP001086.1-201ENST00000494882 321 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC118282.2-201ENST00000508739 374 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 APOOP4-201ENST00000513530 597 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RN7SKP116-201ENST00000516902 319 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AP001636.2-201ENST00000525517 696 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC113368.1-201ENST00000603736 382 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AL365503.1-201ENST00000605247 905 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 RPL21P136-201ENST00000605378 396 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AL158211.2-201ENST00000607282 395 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC068722.2-201ENST00000618734 544 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC068880.4-201ENST00000623082 495 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 BX649567.1-201ENST00000642071 1134 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 ZNF734P-201ENST00000419494 1534 ntBASIC3.27□□□□□ -1.89
UBE2E3Q969T4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.27□□□□□ -1.89
UBE2E3Q969T4 AC007496.3-201ENST00000624987 3443 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC117529.2-201ENST00000512159 2068 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 MIR30E-201ENST00000362104 92 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RNU6-335P-201ENST00000364563 113 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RNU6-468P-201ENST00000384003 109 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RNU6-921P-201ENST00000384361 107 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 MIR607-201ENST00000385241 96 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 MTCO2P31-201ENST00000402702 684 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 HSPE1P26-201ENST00000405341 275 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AL138880.1-201ENST00000405824 642 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RPS29P4-201ENST00000414733 161 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC017079.2-201ENST00000416102 485 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AL356968.1-201ENST00000416622 474 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 CYP4F29P-201ENST00000420685 446 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AL592437.1-201ENST00000443781 492 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC044797.1-201ENST00000445744 679 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RPL31P13-201ENST00000484151 370 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 HMGB1P38-201ENST00000490557 577 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC110768.1-201ENST00000509222 400 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC109471.1-201ENST00000511631 612 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 RNU5A-7P-201ENST00000515979 116 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 OR8I1P-201ENST00000529291 931 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.26□□□□□ -1.89
UBE2E3Q969T4 OR5B10P-201ENST00000532869 642 ntBASIC3.26□□□□□ -1.89
UBE2E3Q969T4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms