Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC023421.1-201ENST00000590535 1785 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-251P-201ENST00000363235 104 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-657P-201ENST00000383904 107 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-209P-201ENST00000384118 107 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-316P-201ENST00000391027 107 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 MRPL42P3-201ENST00000401492 326 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AL109941.1-201ENST00000401925 229 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU4-26P-201ENST00000410270 107 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-370P-201ENST00000411008 104 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RPS7P5-201ENST00000441482 581 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC098591.2-201ENST00000510152 315 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RFPL4AP3-201ENST00000515267 345 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-406P-201ENST00000516470 107 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AP002373.2-201ENST00000541631 1060 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 MIR4436B2-201ENST00000581415 91 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 MIR4436B1-201ENST00000583272 91 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC090525.3-201ENST00000605601 189 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC012603.1-201ENST00000606424 528 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC083806.3-201ENST00000614016 455 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AP002799.1-201ENST00000623552 423 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AC104118.1-201ENST00000607625 1589 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 AL049780.3-201ENST00000624612 1583 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 MTND5P27-201ENST00000428871 1720 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 HSPA8P18-201ENST00000439846 1928 ntBASIC5.62□□□□□ -1.51
SHKBP1Q8TBC3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 SNORA17.1-201ENST00000362945 126 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 SET-203ENST00000372688 801 ntTSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 SNORA70.6-201ENST00000383934 134 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 HMGB1P17-201ENST00000403495 628 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 MIR548K-201ENST00000408406 116 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-193P-201ENST00000410977 107 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC079809.1-201ENST00000415468 276 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AL160004.2-201ENST00000432935 350 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 FAM103A2P-201ENST00000444122 354 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AP004289.2-201ENST00000444413 1457 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 ZNF519P1-201ENST00000449011 1626 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC073415.1-201ENST00000449240 153 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 MRPS31P2-201ENST00000451581 518 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 RPL37P3-201ENST00000456825 293 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC106872.2-201ENST00000494303 480 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 RPS4XP20-201ENST00000505751 772 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 RPL7P20-201ENST00000520308 745 ntBASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.61□□□□□ -1.51
SHKBP1Q8TBC3 AC090502.2-201ENST00000549267 280 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms