Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC069213.2-201ENST00000420238 366 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 RPL12P34-201ENST00000424532 479 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 C8orf59P1-201ENST00000429930 303 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 PTMAP3-201ENST00000447474 330 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 MTCYBP1-201ENST00000454315 1119 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 SNX5P1-201ENST00000505757 1041 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC239860.2-201ENST00000525886 270 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 OR5M7P-201ENST00000526140 972 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 OR6C7P-201ENST00000547875 934 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC063949.1-201ENST00000552900 865 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC093765.1-201ENST00000603758 881 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AL136363.2-201ENST00000604173 851 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 AC012409.3-201ENST00000611343 981 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 CR383658.2-201ENST00000547576 1525 ntBASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CLIP4Q8N3C7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC011155.1-201ENST00000316512 456 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RNU6-517P-201ENST00000384362 110 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL583835.1-201ENST00000399570 407 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL133270.1-201ENST00000402635 279 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL450338.1-201ENST00000407987 512 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC007899.1-201ENST00000412776 775 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 PRELID3BP11-201ENST00000414230 479 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC092647.1-201ENST00000420654 287 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL031736.2-201ENST00000426573 787 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RPL23AP1-201ENST00000428990 471 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RPL23AP15-201ENST00000450202 459 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 EIF4A1P11-201ENST00000451239 222 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 SUMO2P2-201ENST00000456482 255 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RNA5SP269-201ENST00000459032 137 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC011825.1-201ENST00000484967 388 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RPL23AP72-201ENST00000492447 435 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RPL30P11-201ENST00000495304 339 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 MTCYBP17-201ENST00000503579 789 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 CDC42P4-201ENST00000510507 563 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 RNU6-202P-201ENST00000515998 96 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC141257.3-201ENST00000572906 215 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 MTND1P15-201ENST00000579262 949 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 MTATP6P3-201ENST00000581686 676 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 KPNA2P3-201ENST00000584190 848 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 NF1P5-201ENST00000588287 448 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC008687.2-201ENST00000597865 520 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL596327.1-201ENST00000603629 213 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AL354984.3-201ENST00000604803 325 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC107214.2-201ENST00000608204 634 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 AC116651.1-201ENST00000609724 556 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 Z99129.1-201ENST00000612510 255 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 PABPC1P9-201ENST00000426076 1612 ntBASIC3.98□□□□□ -1.77
CLIP4Q8N3C7 OR56B2P-202ENST00000641377 2453 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms