Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 ASNSP1-204ENST00000641977 1664 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AL136164.3-201ENST00000624429 3978 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 Y_RNA.1-201ENST00000352915 104 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 SNORD56.2-201ENST00000363242 71 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 SNORA63-201ENST00000363450 132 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 RN7SKP103-201ENST00000363848 320 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 Y_RNA.460-201ENST00000384255 102 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 RNU6-332P-201ENST00000391193 108 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 VN1R8P-201ENST00000407739 893 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 MIR1302-11-201ENST00000408051 138 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 MIR1302-9-201ENST00000408365 138 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 MIR1302-10-201ENST00000408734 138 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC140479.3-201ENST00000418944 1126 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AL513185.2-201ENST00000425543 193 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 USP9YP9-201ENST00000429406 715 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 RPL7P4-203ENST00000430239 730 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC016831.4-201ENST00000438302 307 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 RPS7P5-201ENST00000441482 581 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 CALM1P1-201ENST00000442082 433 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 MRPL48P1-201ENST00000445390 636 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC239798.3-201ENST00000454459 408 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC022364.2-201ENST00000457963 554 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 RPL12P20-201ENST00000475538 479 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 RPL36AP41-201ENST00000493820 306 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC093809.1-201ENST00000509155 340 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 SNORA48.10-201ENST00000516965 160 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AP003034.1-201ENST00000534621 422 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 DUX4L52-201ENST00000549363 777 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 MIR4443-201ENST00000585052 53 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 RPL12P25-202ENST00000598100 674 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC020910.2-201ENST00000603635 610 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 MIR1302-2-201ENST00000607096 138 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC103710.4-201ENST00000609301 899 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AL136295.6-201ENST00000610486 658 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 MIR6730-201ENST00000622213 67 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 PISRT1-201ENST00000626175 531 ntBASIC4.58□□□□□ -1.68
VRK3Q8IV63 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK3Q8IV63 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VRK3Q8IV63 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VRK3Q8IV63 MTCO1P14-201ENST00000441695 1559 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 ZFRP1-201ENST00000457579 2970 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC000123.3-201ENST00000624029 4975 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 FRG1BP-201ENST00000278882 761 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 OR4A15-201ENST00000314706 1035 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 FRG1CP-201ENST00000358464 769 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 U8.3-201ENST00000363321 132 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 RNU6-1085P-201ENST00000363576 107 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 Y_RNA.409-201ENST00000383990 98 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 RNU6-533P-201ENST00000384144 107 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 SNORD115.1-201ENST00000391109 76 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL133270.1-201ENST00000402635 279 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL049693.1-201ENST00000402760 611 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL034374.1-201ENST00000406329 351 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 SNRPEP10-201ENST00000420249 274 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 SDCBPP2-201ENST00000424643 885 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 NDUFA5P4-201ENST00000436704 385 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.57□□□□□ -1.68
VRK3Q8IV63 SDCBPP1-201ENST00000440192 890 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 H2AFZP5-201ENST00000446960 382 ntBASIC4.57□□□□□ -1.68
VRK3Q8IV63 TRGVB-201ENST00000453257 471 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms