Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL669831.3-213ENST00000636676 183 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AL732372.2-225ENST00000642124 456 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC004972.1-201ENST00000623934 2209 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 AC087516.1-201ENST00000561236 2428 ntBASIC5.12□□□□□ -1.59
ATG4DQ86TL0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4DQ86TL0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC097063.1-201ENST00000426714 1797 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC006206.1-201ENST00000544842 3387 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPL23AP57-201ENST00000332361 466 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 MIR375-201ENST00000362103 64 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RNU6-552P-201ENST00000362869 119 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RNU4-7P-201ENST00000364758 141 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.482-201ENST00000384377 111 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RNU6-601P-201ENST00000384540 107 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPL7P60-201ENST00000397636 735 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 HMGB1P20-201ENST00000402555 677 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPS3AP2-201ENST00000407190 754 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RN7SKP286-201ENST00000410894 299 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RSL24D1P6-201ENST00000426934 401 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPL23AP4-201ENST00000427757 463 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPS20P5-201ENST00000434808 360 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AL450996.1-201ENST00000445574 1202 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 GSTA11P-201ENST00000452866 669 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPS29P15-201ENST00000458329 171 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC023141.9-201ENST00000458734 412 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPL7L1P8-201ENST00000469911 741 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPL12P20-201ENST00000475538 479 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RPL22P13-201ENST00000493291 347 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC034222.1-201ENST00000494052 532 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 SNORD27.1-201ENST00000516319 72 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 RN7SKP283-201ENST00000517197 270 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AP005435.4-201ENST00000529514 284 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 BNIP3P25-201ENST00000596023 559 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AL512624.1-201ENST00000613638 469 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AL355810.1-201ENST00000614629 552 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC241377.1-201ENST00000619797 406 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC092608.2-201ENST00000624427 218 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4DQ86TL0 AC068870.1-201ENST00000563737 2455 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 BCORP1-203ENST00000513194 5093 ntBASIC5.11□□□□□ -1.59
ATG4DQ86TL0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.117-201ENST00000363294 101 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 RNA5SP394-201ENST00000364216 119 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.252-201ENST00000364556 101 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.378-201ENST00000365652 113 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.389-201ENST00000383924 113 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 RNU6-890P-201ENST00000384121 107 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ATG4DQ86TL0 RPL6P29-201ENST00000414863 865 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 AC048351.1-201ENST00000420064 602 ntBASIC5.1□□□□□ -1.59
ATG4DQ86TL0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms