Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 IMMP1LP2-201ENST00000552954 492 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC008782.1-201ENST00000603386 430 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 7SK.7-201ENST00000603504 247 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC005191.1-201ENST00000603950 358 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC133104.2-201ENST00000615272 193 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC01963-201ENST00000562038 3148 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 MTND5P10-201ENST00000603719 1809 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC020656.2-201ENST00000613291 5309 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MIR133A2-201ENST00000347538 102 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-511P-201ENST00000363496 107 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SNORA62.1-201ENST00000364287 154 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-1293P-201ENST00000384077 107 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-278P-201ENST00000390945 109 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AL031985.1-201ENST00000392713 418 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AL356057.3-201ENST00000402607 340 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MIR548F5-201ENST00000408421 86 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SNORD121B-201ENST00000458838 81 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RNU7-59P-201ENST00000459101 61 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SIAH1P1-201ENST00000479411 923 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC092436.1-201ENST00000506450 503 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SNORA70.11-201ENST00000515987 138 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SNORA70.13-201ENST00000516116 138 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 Y_RNA.682-201ENST00000516457 100 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC009902.1-201ENST00000519351 183 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 APOOP3-201ENST00000536787 586 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC024224.1-201ENST00000538284 609 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 DNAJC8P1-201ENST00000554535 372 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 HMGN2P47-201ENST00000559378 272 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MRPS21P7-201ENST00000566937 238 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC010547.6-201ENST00000571789 193 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 BNIP3P25-201ENST00000596023 559 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 uc_338.34-201ENST00000617467 174 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-156P-201ENST00000621869 107 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AC244517.12-201ENST00000623581 663 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 CU639417.4-201ENST00000623928 207 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AL359757.2-201ENST00000624309 274 ntBASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3DQ7Z6J8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3DQ7Z6J8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms