Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 MIR4776-2-201ENST00000580204 80 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 U1.25-201ENST00000614085 162 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 U1.31-201ENST00000620022 160 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AL355488.2-201ENST00000609909 2850 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 OR55B1P-203ENST00000641518 2602 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC024651.2-201ENST00000562480 2098 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 HDAC1P2-201ENST00000453661 1398 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 HSPE1P11-201ENST00000339579 310 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RNU5A-8P-201ENST00000364102 114 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RNU6-22P-201ENST00000384355 107 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 HMGB3P7-201ENST00000400214 611 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 MIR450B-201ENST00000401182 78 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AP000580.1-201ENST00000404439 358 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RNU6-272P-201ENST00000411028 104 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 DPPA2P3-201ENST00000411853 655 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AL139156.1-201ENST00000412785 841 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RPL35AP3-201ENST00000414680 288 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC012065.2-201ENST00000421295 375 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AL445466.1-201ENST00000448432 357 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 CHEK2P4-201ENST00000450340 246 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AL162388.1-201ENST00000450912 352 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RPS15AP17-201ENST00000470598 390 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RPL7P6-201ENST00000480903 738 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC105758.1-201ENST00000506038 399 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RPL21P12-201ENST00000559810 515 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC090517.1-201ENST00000569307 266 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 MIR3146-201ENST00000580367 79 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 MIR5188-201ENST00000583467 113 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 FO393422.1-201ENST00000603908 708 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AL691477.1-201ENST00000624398 162 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AC023421.1-201ENST00000590535 1785 ntBASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CTC1Q2NKJ3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 KPNA2P2-201ENST00000419546 1489 ntBASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
CTC1Q2NKJ3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms