Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL162388.1-201ENST00000450912 352 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN20P56880 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN20P56880 AC097493.1-201ENST00000463958 372 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 UQCRHP4-201ENST00000471686 272 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC105137.1-201ENST00000484355 562 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 RN7SL691P-201ENST00000494487 301 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN20P56880 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN20P56880 LTV1P1-201ENST00000510683 1237 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC008958.1-201ENST00000511047 682 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 MIR2114-201ENST00000516645 80 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN20P56880 AC239860.2-201ENST00000525886 270 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.87□□□□□ -1.79
CLDN20P56880 PHBP17-201ENST00000528576 541 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN20P56880 PTP4A1P6-201ENST00000531034 478 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.87□□□□□ -1.79
CLDN20P56880 TVP23BP1-201ENST00000557500 617 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN20P56880 HSPE1P3-201ENST00000559254 309 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 MIR4697-201ENST00000582977 78 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN20P56880 AC083899.3-201ENST00000603413 594 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AL590392.1-201ENST00000604960 446 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC080013.6-201ENST00000606185 215 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AL159169.3-201ENST00000608871 561 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN20P56880 AP006248.2-201ENST00000623309 592 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 AC079228.1-201ENST00000624774 1049 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 MIR3653-201ENST00000625572 110 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
CLDN20P56880 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN20P56880 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN20P56880 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN20P56880 Z73965.1-201ENST00000623412 2297 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN20P56880 DDX43P2-201ENST00000604753 1354 ntBASIC3.87□□□□□ -1.79
CLDN20P56880 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN20P56880 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLDN20P56880 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLDN20P56880 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN20P56880 AC027290.2-201ENST00000623210 18662 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN20P56880 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN20P56880 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN20P56880 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLDN20P56880 RNU6-500P-201ENST00000362349 107 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 SNORD116-1-201ENST00000384335 95 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RNU1-89P-201ENST00000384592 164 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 HSPD1P16-201ENST00000402302 394 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RN7SKP235-201ENST00000410662 305 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.86□□□□□ -1.79
CLDN20P56880 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.86□□□□□ -1.79
CLDN20P56880 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RN7SL585P-201ENST00000470538 280 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN20P56880 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN20P56880 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN20P56880 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC112198.1-201ENST00000505369 1220 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AC108475.1-201ENST00000507880 950 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RNA5SP216-201ENST00000516111 123 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RNA5SP519-201ENST00000516480 119 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 RN7SKP277-201ENST00000516895 283 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.86□□□□□ -1.79
CLDN20P56880 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 AC092470.1-201ENST00000546187 132 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AC007566.2-201ENST00000603642 413 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 BNIP3P11-201ENST00000603878 563 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AC105129.3-201ENST00000605455 485 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 MIR6716-201ENST00000613413 80 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AL445567.2-201ENST00000618935 498 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN20P56880 AC091931.1-201ENST00000623488 728 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN20P56880 U6.101-201ENST00000637707 76 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AL513185.3-201ENST00000433335 1300 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN20P56880 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CLDN20P56880 OR4G11P-202ENST00000642116 1414 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 AL139811.1-201ENST00000424779 2299 ntBASIC3.86□□□□□ -1.79
CLDN20P56880 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN20P56880 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN20P56880 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN20P56880 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN20P56880 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN20P56880 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms