Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN12P56749 AC073264.1-201ENST00000411508 416 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 RAB28P1-201ENST00000411517 641 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN12P56749 RPL7P46-201ENST00000425129 740 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 SNRPEP4-201ENST00000435815 279 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN12P56749 MRPL35P4-201ENST00000453682 566 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 HMGB1P15-201ENST00000453854 435 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN12P56749 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN12P56749 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN12P56749 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 RPL21P18-201ENST00000469899 480 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN12P56749 AC005726.1-201ENST00000494679 427 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN12P56749 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.77□□□□□ -1.97
CLDN12P56749 AC105914.1-201ENST00000511798 226 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.77□□□□□ -1.97
CLDN12P56749 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN12P56749 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN12P56749 AC007224.1-201ENST00000564410 144 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN12P56749 AP001029.3-201ENST00000588063 596 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC022916.3-201ENST00000592961 742 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AL133393.1-201ENST00000603277 287 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN12P56749 AC004832.5-201ENST00000608677 401 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC009032.1-201ENST00000617574 431 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AC018926.3-201ENST00000618841 406 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 AL590240.3-201ENST00000621416 943 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.77□□□□□ -1.97
CLDN12P56749 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN12P56749 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN12P56749 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN12P56749 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AL359837.1-201ENST00000381357 287 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN12P56749 AL354719.1-201ENST00000406535 843 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 RNA5SP56-201ENST00000410277 118 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 RN7SKP111-201ENST00000410349 271 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN12P56749 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN12P56749 RPS3AP9-201ENST00000417027 792 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AC073063.1-201ENST00000434352 607 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 NOTCH2P1-201ENST00000443481 624 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 RPS15AP29-201ENST00000445539 400 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN12P56749 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN12P56749 AC073522.1-201ENST00000483312 377 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AC118282.1-201ENST00000506408 765 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CLDN12P56749 AC119751.1-201ENST00000513357 765 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 RNU6-760P-201ENST00000516078 97 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 SNORA31.20-201ENST00000517111 133 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 RNU6-711P-201ENST00000517255 106 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN12P56749 OR5AK3P-201ENST00000527486 1297 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN12P56749 AC007536.1-201ENST00000533382 349 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.76□□□□□ -1.97
CLDN12P56749 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN12P56749 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.76□□□□□ -1.97
CLDN12P56749 AL355812.1-201ENST00000603215 216 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AC113368.1-201ENST00000603736 382 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AL451086.1-201ENST00000605596 223 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AC068831.7-201ENST00000616954 363 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AC092650.2-201ENST00000619984 902 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 AL356490.1-201ENST00000623079 479 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN12P56749 MTND5P19-201ENST00000424872 1794 ntBASIC2.76□□□□□ -1.97
CLDN12P56749 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CLDN12P56749 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN12P56749 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN12P56749 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN12P56749 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN12P56749 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN12P56749 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
CLDN12P56749 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN12P56749 RN7SKP280-201ENST00000364196 304 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms