Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PEX3P56589 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PEX3P56589 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.76□□□□□ -1.81
PEX3P56589 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PEX3P56589 MTCO1P56-201ENST00000401674 224 ntBASIC3.76□□□□□ -1.81
PEX3P56589 RPL7P27-201ENST00000403775 720 ntBASIC3.76□□□□□ -1.81
PEX3P56589 RN7SKP111-201ENST00000410349 271 ntBASIC3.76□□□□□ -1.81
PEX3P56589 Z99755.1-201ENST00000414048 380 ntBASIC3.76□□□□□ -1.81
PEX3P56589 RPS7P15-201ENST00000415804 584 ntBASIC3.76□□□□□ -1.81
PEX3P56589 LIPT1P1-201ENST00000415870 1186 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.76□□□□□ -1.81
PEX3P56589 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.76□□□□□ -1.81
PEX3P56589 HSFY1P1-201ENST00000423928 1178 ntBASIC3.76□□□□□ -1.81
PEX3P56589 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.76□□□□□ -1.81
PEX3P56589 UBE2V1P5-201ENST00000440070 405 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AL358794.1-201ENST00000445689 381 ntBASIC3.76□□□□□ -1.81
PEX3P56589 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.76□□□□□ -1.81
PEX3P56589 HMGN2P7-201ENST00000456186 273 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AC096992.1-201ENST00000459808 709 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.76□□□□□ -1.81
PEX3P56589 AC087385.1-201ENST00000475062 312 ntBASIC3.76□□□□□ -1.81
PEX3P56589 RPL30P11-201ENST00000495304 339 ntBASIC3.76□□□□□ -1.81
PEX3P56589 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.76□□□□□ -1.81
PEX3P56589 FCF1P8-201ENST00000510322 597 ntBASIC3.76□□□□□ -1.81
PEX3P56589 RNU6-1231P-201ENST00000517185 103 ntBASIC3.76□□□□□ -1.81
PEX3P56589 OR4R3P-201ENST00000525084 838 ntBASIC3.76□□□□□ -1.81
PEX3P56589 OR4A2P-201ENST00000527276 913 ntBASIC3.76□□□□□ -1.81
PEX3P56589 NDUFS5P6-201ENST00000529136 295 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.76□□□□□ -1.81
PEX3P56589 CYP2C60P-201ENST00000566088 139 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.76□□□□□ -1.81
PEX3P56589 RPAP2P1-201ENST00000603626 1168 ntBASIC3.76□□□□□ -1.81
PEX3P56589 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.76□□□□□ -1.81
PEX3P56589 AC103710.3-201ENST00000608157 948 ntBASIC3.76□□□□□ -1.81
PEX3P56589 MIR7975-201ENST00000619350 68 ntBASIC3.76□□□□□ -1.81
PEX3P56589 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PEX3P56589 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
PEX3P56589 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PEX3P56589 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.76□□□□□ -1.81
PEX3P56589 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PEX3P56589 AC111188.2-201ENST00000529697 1387 ntBASIC3.76□□□□□ -1.81
PEX3P56589 AC138393.1-206ENST00000540997 1886 ntBASIC3.75□□□□□ -1.81
PEX3P56589 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 AL049781.1-201ENST00000623195 3585 ntBASIC3.75□□□□□ -1.81
PEX3P56589 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PEX3P56589 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PEX3P56589 RNU1-33P-201ENST00000364249 162 ntBASIC3.75□□□□□ -1.81
PEX3P56589 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 RNU6-328P-201ENST00000390887 106 ntBASIC3.75□□□□□ -1.81
PEX3P56589 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 RNU6-575P-201ENST00000411326 105 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC106883.1-201ENST00000418805 562 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 MTCYBP15-201ENST00000433123 1127 ntBASIC3.75□□□□□ -1.81
PEX3P56589 USP9YP7-201ENST00000436723 430 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 MTCO1P53-201ENST00000441633 699 ntBASIC3.75□□□□□ -1.81
PEX3P56589 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.75□□□□□ -1.81
PEX3P56589 USP9YP32-201ENST00000452432 430 ntBASIC3.75□□□□□ -1.81
PEX3P56589 PRSS3P4-201ENST00000453323 162 ntBASIC3.75□□□□□ -1.81
PEX3P56589 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AC034236.1-201ENST00000469891 373 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC093663.1-201ENST00000497190 394 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AC008837.1-201ENST00000511513 412 ntBASIC3.75□□□□□ -1.81
PEX3P56589 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PEX3P56589 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.75□□□□□ -1.81
PEX3P56589 RNU6-276P-201ENST00000516114 96 ntBASIC3.75□□□□□ -1.81
PEX3P56589 RNA5SP309-201ENST00000516670 106 ntBASIC3.75□□□□□ -1.81
PEX3P56589 HMGB1P1-201ENST00000522557 636 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC021451.1-201ENST00000523498 1129 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC104417.1-201ENST00000523974 751 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 RN7SL339P-201ENST00000580597 296 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.75□□□□□ -1.81
PEX3P56589 AC006557.5-201ENST00000603126 811 ntBASIC3.75□□□□□ -1.81
PEX3P56589 ELOCP35-201ENST00000604289 336 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC009948.4-201ENST00000604692 675 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AP004247.3-201ENST00000608682 624 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC012531.5-201ENST00000611375 151 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC008121.2-201ENST00000614647 523 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC084757.4-201ENST00000616350 526 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC243756.2-201ENST00000618406 463 ntBASIC3.75□□□□□ -1.81
PEX3P56589 AC004777.1-201ENST00000624317 287 ntBASIC3.75□□□□□ -1.81
PEX3P56589 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
PEX3P56589 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PEX3P56589 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms