Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIMK1P53667 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
LIMK1P53667 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
LIMK1P53667 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LIMK1P53667 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
LIMK1P53667 SNORA60-201ENST00000362396 134 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 RNU6-1226P-201ENST00000384317 107 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 Y_RNA.472-201ENST00000384322 102 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 MIR217-201ENST00000384817 110 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 MIR649-201ENST00000384843 97 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 RPL21P17-201ENST00000397467 475 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 RNA5SP306-201ENST00000411087 107 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 HSPE1P12-201ENST00000412576 301 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AMD1P2-201ENST00000412936 992 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 RPS3AP9-201ENST00000417027 792 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 MTCO3P1-205ENST00000422088 832 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 PRELID3BP10-201ENST00000431957 584 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 USP9YP24-201ENST00000434374 697 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 USP9YP17-201ENST00000444617 696 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 AL009048.1-201ENST00000450437 298 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AC079776.3-201ENST00000450665 370 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AC092155.2-201ENST00000454675 477 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 RPL7P1-201ENST00000468161 747 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 VN1R17P-201ENST00000472048 1090 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AF213884.1-201ENST00000488102 463 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 RNF138P1-201ENST00000502765 546 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 BOLA3P3-201ENST00000505182 232 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC104057.1-201ENST00000515547 497 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AP001189.2-201ENST00000527320 189 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.03□□□□□ -1.76
LIMK1P53667 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC022655.2-201ENST00000577280 318 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 SNORD39.3-201ENST00000584451 71 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.03□□□□□ -1.76
LIMK1P53667 AC005000.2-201ENST00000605468 310 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 AL391497.1-201ENST00000608671 547 ntBASIC4.03□□□□□ -1.76
LIMK1P53667 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LIMK1P53667 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LIMK1P53667 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMK1P53667 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LIMK1P53667 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIMK1P53667 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIMK1P53667 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMK1P53667 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LIMK1P53667 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LIMK1P53667 snoZ40.1-201ENST00000364540 72 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 U8.11-201ENST00000384699 133 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 U8.12-201ENST00000384701 133 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 MIR30B-201ENST00000384850 88 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 MIR218-2-201ENST00000385006 110 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AL138880.1-201ENST00000405824 642 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 RNU2-71P-201ENST00000411395 189 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 MTATP6P20-201ENST00000414147 562 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 AL159169.1-201ENST00000421119 127 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 NANOGP5-201ENST00000424456 877 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC092648.1-201ENST00000425870 423 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 CYCSP32-201ENST00000440548 321 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 EEF1A1P39-201ENST00000440791 250 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 OR10R1P-201ENST00000441524 1141 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 ABCF2P2-201ENST00000450549 296 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.02□□□□□ -1.77
LIMK1P53667 U8.18-201ENST00000459285 133 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.02□□□□□ -1.77
LIMK1P53667 WBP1LP4-201ENST00000505043 344 ntBASIC4.02□□□□□ -1.77
LIMK1P53667 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms