Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CR1P49238 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CR1P49238 AC116096.1-201ENST00000566804 2314 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 FRG1CP-201ENST00000358464 769 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 SNORD9-201ENST00000362566 104 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RNA5SP295-201ENST00000362655 121 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 SNORA73.2-201ENST00000364946 201 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CR1P49238 DEFB109C-201ENST00000382575 264 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 DEFB109B-201ENST00000382656 264 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CX3CR1P49238 EI24P2-201ENST00000397776 1076 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RPS7P13-201ENST00000413955 498 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RAD23BP2-201ENST00000416003 1207 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AL606495.1-201ENST00000422100 813 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CR1P49238 AL049610.1-201ENST00000423374 372 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CR1P49238 AC006548.1-201ENST00000427470 102 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 B3GNT2P1-201ENST00000434960 952 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.07□□□□□ -1.92
CX3CR1P49238 AL357552.1-201ENST00000445254 415 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC104073.1-201ENST00000451988 151 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 NAP1L1P3-201ENST00000462291 880 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 OR5H5P-201ENST00000503164 928 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CR1P49238 AC004062.1-201ENST00000509926 645 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.07□□□□□ -1.92
CX3CR1P49238 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.07□□□□□ -1.92
CX3CR1P49238 RN7SKP21-201ENST00000516503 220 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 SNORA70.18-201ENST00000516696 98 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 SNORA70.19-201ENST00000516717 90 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CR1P49238 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.07□□□□□ -1.92
CX3CR1P49238 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CR1P49238 NIFKP8-201ENST00000560500 874 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CR1P49238 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CR1P49238 XIAPP1-201ENST00000603162 600 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 DPRXP5-201ENST00000604662 539 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 U4.6-201ENST00000621618 127 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC092628.2-201ENST00000622492 339 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC097460.3-201ENST00000623099 442 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 CR381572.1-201ENST00000625098 102 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CR1P49238 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CR1P49238 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CR1P49238 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CX3CR1P49238 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CX3CR1P49238 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CX3CR1P49238 AL513302.2-201ENST00000562313 1842 ntBASIC3.07□□□□□ -1.92
CX3CR1P49238 AC004925.1-201ENST00000624256 2706 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CR1P49238 MIR30E-201ENST00000362104 92 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CR1P49238 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CR1P49238 MIR591-201ENST00000385290 95 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CR1P49238 RPL31P1-201ENST00000398116 372 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 PTGES3P2-201ENST00000407942 482 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 RNA5SP31-201ENST00000411144 127 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 DBIP2-201ENST00000419076 262 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AL035423.1-201ENST00000420331 213 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 FNDC3CP-201ENST00000420795 1155 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC091390.1-201ENST00000433904 331 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 RPL7P59-201ENST00000447700 943 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 RPS4XP2-201ENST00000458402 793 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 RPS27AP1-201ENST00000475545 471 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC091959.2-201ENST00000477363 321 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC012181.1-201ENST00000479895 423 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 RPL23AP44-201ENST00000482216 473 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.06□□□□□ -1.92
CX3CR1P49238 FABP5P12-201ENST00000515543 389 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 HMGB1P1-201ENST00000522557 636 ntBASIC3.06□□□□□ -1.92
CX3CR1P49238 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CR1P49238 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms