Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NPM1P13-201ENST00000452663 865 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AL136097.1-201ENST00000456945 913 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 RPL23AP62-201ENST00000463396 453 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AC108729.2-201ENST00000476543 840 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 RPS4XP22-201ENST00000480755 780 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 RN7SL432P-201ENST00000484057 298 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.13□□□□□ -1.91
CXCL12P48061 RPL23AP92-201ENST00000603609 255 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AC136601.2-201ENST00000604356 474 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AL034351.1-201ENST00000605288 668 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AC135178.6-201ENST00000605314 398 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL12P48061 AL162574.2-201ENST00000614618 657 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 MIR6715A-201ENST00000615929 79 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 AC090617.9-201ENST00000623751 147 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.13□□□□□ -1.91
CXCL12P48061 AC116563.2-201ENST00000624751 535 ntBASIC3.13□□□□□ -1.91
CXCL12P48061 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.13□□□□□ -1.91
CXCL12P48061 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CXCL12P48061 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CXCL12P48061 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 RNU4-31P-201ENST00000384211 141 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 RNA5SP184-201ENST00000411071 108 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 RHEBP3-201ENST00000411920 351 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL12P48061 OOSP1P1-201ENST00000423265 274 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC009965.2-201ENST00000425328 970 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 MORF4L1P7-201ENST00000426038 703 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC011242.1-201ENST00000433596 1158 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 CST9LP2-201ENST00000437612 320 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC093156.1-201ENST00000440382 670 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC007000.2-201ENST00000442564 487 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL12P48061 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC233982.1-201ENST00000451247 436 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC012170.1-201ENST00000495139 359 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.12□□□□□ -1.91
CXCL12P48061 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 SNORA31.13-201ENST00000516624 135 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC103833.1-201ENST00000517442 172 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CXCL12P48061 AL139174.1-201ENST00000531489 886 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC099489.2-201ENST00000574976 260 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 ZNF92P3-201ENST00000596594 954 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC245100.7-201ENST00000609678 442 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 MIR7973-1-201ENST00000614683 76 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.12□□□□□ -1.91
CXCL12P48061 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 RNF6P1-201ENST00000444889 1784 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL12P48061 AC096656.1-201ENST00000623826 1364 ntBASIC3.12□□□□□ -1.91
CXCL12P48061 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL12P48061 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 GTF2H2B-203ENST00000508065 1432 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 CR381670.1-201ENST00000624291 1693 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CXCL12P48061 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL12P48061 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CXCL12P48061 RNU6-317P-201ENST00000384031 107 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 TAF9BP2-201ENST00000400856 499 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 RPL7P25-201ENST00000404151 721 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 XKRYP4-201ENST00000414395 483 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL357078.2-201ENST00000416486 427 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 TRGV6-201ENST00000417928 299 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL12P48061 FO393419.3-201ENST00000428741 282 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 RPS26P40-201ENST00000435209 294 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AL031663.1-201ENST00000437445 219 ntBASIC3.11□□□□□ -1.91
CXCL12P48061 AC108734.1-201ENST00000439549 399 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms