Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR5BE1P-202ENST00000641168 1176 ntBASIC3.91□□□□□ -1.78
HNF4AP41235 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HNF4AP41235 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HNF4AP41235 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HNF4AP41235 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
HNF4AP41235 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HNF4AP41235 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HNF4AP41235 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
HNF4AP41235 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HNF4AP41235 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HNF4AP41235 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HNF4AP41235 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HNF4AP41235 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 RNU6-50P-201ENST00000362356 103 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 RNA5SP295-201ENST00000362655 121 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 RNA5SP130-201ENST00000364431 114 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 SNORA70C-201ENST00000384538 135 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 PTMAP5-201ENST00000393073 333 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.9□□□□□ -1.79
HNF4AP41235 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 RNA5SP129-201ENST00000410276 118 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 RN7SKP33-201ENST00000410942 340 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 HSPE1P12-201ENST00000412576 301 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AL136133.1-201ENST00000413694 376 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 SDCBPP2-201ENST00000424643 885 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 AF228730.2-201ENST00000438784 848 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 VN1R25P-201ENST00000443385 738 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AL591719.1-201ENST00000444669 744 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 MTCO1P48-201ENST00000448024 1096 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 HMGB1P15-201ENST00000453854 435 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC092155.2-201ENST00000454675 477 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 VN1R40P-201ENST00000455196 941 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
HNF4AP41235 RPL7P19-201ENST00000469948 618 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 AC093267.1-201ENST00000489176 961 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC108078.3-201ENST00000502633 489 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC084024.2-201ENST00000503480 791 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HNF4AP41235 NDUFS5P6-201ENST00000529136 295 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 DUXAP5-201ENST00000529668 529 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AP001317.1-201ENST00000531194 960 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.9□□□□□ -1.79
HNF4AP41235 AC044913.1-201ENST00000557200 430 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.9□□□□□ -1.79
HNF4AP41235 AL591034.3-201ENST00000605511 685 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.9□□□□□ -1.79
HNF4AP41235 AP000484.1-201ENST00000620067 1252 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 AC011330.2-201ENST00000621680 635 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 U6.98-201ENST00000637157 84 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.79
HNF4AP41235 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HNF4AP41235 AC244517.1-201ENST00000606030 2086 ntBASIC3.9□□□□□ -1.79
HNF4AP41235 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HNF4AP41235 MTND4P34-201ENST00000572715 1371 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HNF4AP41235 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
HNF4AP41235 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 RNU6-236P-201ENST00000363886 106 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AL138878.1-201ENST00000405131 347 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 RNU4-22P-201ENST00000411058 166 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 HIGD1AP15-201ENST00000416198 280 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 RSL24D1P6-201ENST00000426934 401 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC011742.1-201ENST00000431448 434 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AL590103.1-201ENST00000434488 307 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AC096638.2-201ENST00000434965 711 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 PTGES3P1-201ENST00000439531 483 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 snoU13.4-201ENST00000458916 104 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 MTCO2P6-201ENST00000463134 685 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 RPS7P7-201ENST00000463499 571 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.89□□□□□ -1.79
HNF4AP41235 PPIAP15-201ENST00000479662 484 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.89□□□□□ -1.79
HNF4AP41235 AC004062.1-201ENST00000509926 645 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 MTCO1P35-201ENST00000515270 228 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.89□□□□□ -1.79
HNF4AP41235 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.89□□□□□ -1.79
HNF4AP41235 RNA5SP468-201ENST00000516782 93 ntBASIC3.89□□□□□ -1.79
HNF4AP41235 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms