Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC048347.1-201ENST00000624621 427 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AL109659.3-201ENST00000624985 950 ntBASIC3.16□□□□□ -1.9
RFC3P40938 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.16□□□□□ -1.9
RFC3P40938 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
RFC3P40938 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFC3P40938 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFC3P40938 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.15□□□□□ -1.9
RFC3P40938 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.15□□□□□ -1.91
RFC3P40938 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
RFC3P40938 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFC3P40938 RNA5SP197-201ENST00000363357 119 ntBASIC3.15□□□□□ -1.91
RFC3P40938 RNU6-525P-201ENST00000363685 104 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AC234772.1-201ENST00000377927 937 ntBASIC3.15□□□□□ -1.91
RFC3P40938 RNU6-1005P-201ENST00000384519 107 ntBASIC3.15□□□□□ -1.91
RFC3P40938 SNORA11C-201ENST00000408532 129 ntBASIC3.15□□□□□ -1.91
RFC3P40938 RNU6-272P-201ENST00000411028 104 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.15□□□□□ -1.91
RFC3P40938 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.15□□□□□ -1.91
RFC3P40938 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.15□□□□□ -1.91
RFC3P40938 RPL21P112-201ENST00000434403 463 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.15□□□□□ -1.91
RFC3P40938 AL591503.2-201ENST00000442314 1005 ntBASIC3.15□□□□□ -1.91
RFC3P40938 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.15□□□□□ -1.91
RFC3P40938 MTND1P33-201ENST00000446251 917 ntBASIC3.15□□□□□ -1.91
RFC3P40938 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.15□□□□□ -1.91
RFC3P40938 DNAJC19P8-201ENST00000452887 259 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AC007967.1-201ENST00000455422 1159 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
RFC3P40938 AC108729.2-201ENST00000476543 840 ntBASIC3.15□□□□□ -1.91
RFC3P40938 RPL32P34-201ENST00000486380 400 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.15□□□□□ -1.91
RFC3P40938 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
RFC3P40938 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
RFC3P40938 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.15□□□□□ -1.91
RFC3P40938 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.15□□□□□ -1.91
RFC3P40938 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.15□□□□□ -1.91
RFC3P40938 EIF5A2P1-201ENST00000564027 460 ntBASIC3.15□□□□□ -1.91
RFC3P40938 ATP5F1P7-201ENST00000567330 760 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.15□□□□□ -1.91
RFC3P40938 MIR5195-201ENST00000583555 115 ntBASIC3.15□□□□□ -1.91
RFC3P40938 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.15□□□□□ -1.91
RFC3P40938 AC079880.2-201ENST00000603790 1213 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AL162713.1-201ENST00000604480 262 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AL354976.1-201ENST00000613843 387 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.15□□□□□ -1.91
RFC3P40938 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.15□□□□□ -1.91
RFC3P40938 MIR3651-201ENST00000630427 90 ntBASIC3.15□□□□□ -1.91
RFC3P40938 AL356118.1-201ENST00000635272 1078 ntBASIC3.15□□□□□ -1.91
RFC3P40938 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFC3P40938 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
RFC3P40938 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFC3P40938 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.15□□□□□ -1.91
RFC3P40938 AC058791.1-201ENST00000608412 3198 ntBASIC3.14□□□□□ -1.91
RFC3P40938 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
RFC3P40938 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFC3P40938 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RFC3P40938 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RFC3P40938 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RFC3P40938 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
RFC3P40938 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RFC3P40938 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFC3P40938 RNA5SP42-201ENST00000364278 115 ntBASIC3.14□□□□□ -1.91
RFC3P40938 RNU6-335P-201ENST00000364563 113 ntBASIC3.14□□□□□ -1.91
RFC3P40938 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFC3P40938 ATP5F1P6-201ENST00000402768 767 ntBASIC3.14□□□□□ -1.91
RFC3P40938 RNA5SP120-201ENST00000410900 112 ntBASIC3.14□□□□□ -1.91
RFC3P40938 RNU6-55P-201ENST00000411092 107 ntBASIC3.14□□□□□ -1.91
RFC3P40938 RNU6-954P-201ENST00000411355 107 ntBASIC3.14□□□□□ -1.91
RFC3P40938 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.14□□□□□ -1.91
RFC3P40938 AC005326.1-201ENST00000429197 123 ntBASIC3.14□□□□□ -1.91
RFC3P40938 RPL36P19-201ENST00000430744 301 ntBASIC3.14□□□□□ -1.91
RFC3P40938 PTP4A1P3-201ENST00000433661 420 ntBASIC3.14□□□□□ -1.91
RFC3P40938 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
RFC3P40938 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AC087879.1-201ENST00000474343 374 ntBASIC3.14□□□□□ -1.91
RFC3P40938 CAB39P1-201ENST00000502277 460 ntBASIC3.14□□□□□ -1.91
RFC3P40938 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
RFC3P40938 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AC008489.1-201ENST00000524271 483 ntBASIC3.14□□□□□ -1.91
RFC3P40938 OR5AP1P-201ENST00000529730 940 ntBASIC3.14□□□□□ -1.91
RFC3P40938 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.14□□□□□ -1.91
RFC3P40938 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.14□□□□□ -1.91
RFC3P40938 TGIF1P1-201ENST00000558095 802 ntBASIC3.14□□□□□ -1.91
RFC3P40938 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.14□□□□□ -1.91
RFC3P40938 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.14□□□□□ -1.91
RFC3P40938 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.14□□□□□ -1.91
RFC3P40938 AC020658.4-201ENST00000613987 684 ntBASIC3.14□□□□□ -1.91
RFC3P40938 U73479.1-201ENST00000618062 168 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms