Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN4AP35499 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
SCN4AP35499 AC007342.9-201ENST00000623877 1385 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN4AP35499 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SCN4AP35499 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN4AP35499 SNORD56.3-201ENST00000363507 71 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 RNU6-1331P-201ENST00000363658 106 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
SCN4AP35499 AL360182.1-201ENST00000397433 468 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.43□□□□□ -1.86
SCN4AP35499 AL513477.1-202ENST00000417061 214 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SCN4AP35499 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN4AP35499 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.43□□□□□ -1.86
SCN4AP35499 AL590410.1-201ENST00000617925 333 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 AC022509.4-201ENST00000621404 572 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 AC091903.1-201ENST00000624322 454 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCN4AP35499 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN4AP35499 EXOC5P1-201ENST00000510543 1969 ntBASIC3.43□□□□□ -1.86
SCN4AP35499 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN4AP35499 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN4AP35499 RNU6-697P-201ENST00000363348 107 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN4AP35499 MIR592-201ENST00000384959 97 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 RN7SKP223-201ENST00000410582 62 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 DUTP6-201ENST00000425573 462 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN4AP35499 AP000893.1-201ENST00000474462 794 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 DEFB122-202ENST00000569013 197 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.42□□□□□ -1.86
SCN4AP35499 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 AC067838.1-201ENST00000606064 577 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 MIR6817-201ENST00000615588 66 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN4AP35499 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN4AP35499 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN4AP35499 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SCN4AP35499 RNU6-819P-201ENST00000364116 107 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
SCN4AP35499 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN4AP35499 AC245291.1-201ENST00000419501 328 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN4AP35499 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.42□□□□□ -1.86
SCN4AP35499 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN4AP35499 RPL31P53-201ENST00000457065 348 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 HMGN1P8-201ENST00000463578 288 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN4AP35499 AC068657.1-201ENST00000520807 306 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 AC008676.3-201ENST00000521237 435 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 AP003122.3-201ENST00000526316 255 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SCN4AP35499 SERPINE4P-201ENST00000554978 281 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN4AP35499 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN4AP35499 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN4AP35499 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN4AP35499 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.42□□□□□ -1.86
SCN4AP35499 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 MAPK10-373ENST00000641983 6772 ntBASIC3.42□□□□□ -1.86
SCN4AP35499 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN4AP35499 RNA5SP383-201ENST00000362934 120 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SCN4AP35499 RAP1BP1-201ENST00000412709 553 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 PTP4A1P5-201ENST00000420305 455 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.41□□□□□ -1.86
SCN4AP35499 RWDD4P2-201ENST00000426392 563 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 AL603825.1-201ENST00000438481 80 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 HMGB3P11-201ENST00000440127 604 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN4AP35499 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN4AP35499 snoU13.23-201ENST00000458863 104 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 RNU6-775P-201ENST00000459318 96 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 AC021205.1-201ENST00000468797 348 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 RWDD4P1-201ENST00000488019 565 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 RN7SL20P-201ENST00000488827 297 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN4AP35499 AC005351.1-201ENST00000511152 786 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN4AP35499 AC138473.1-201ENST00000605717 526 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 AC117490.2-201ENST00000610042 594 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 AL391597.1-201ENST00000618707 694 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN4AP35499 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCN4AP35499 AC093775.1-201ENST00000624154 1868 ntBASIC3.41□□□□□ -1.86
SCN4AP35499 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.41□□□□□ -1.86
SCN4AP35499 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.4□□□□□ -1.86
SCN4AP35499 RNA5SP425-201ENST00000410336 112 ntBASIC3.4□□□□□ -1.86
SCN4AP35499 AC106901.1-201ENST00000425086 698 ntBASIC3.4□□□□□ -1.86
SCN4AP35499 WASF1P1-201ENST00000447560 1131 ntBASIC3.4□□□□□ -1.86
SCN4AP35499 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.4□□□□□ -1.86
SCN4AP35499 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.4□□□□□ -1.86
SCN4AP35499 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.4□□□□□ -1.86
SCN4AP35499 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.4□□□□□ -1.86
SCN4AP35499 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.4□□□□□ -1.86
SCN4AP35499 AC073476.4-201ENST00000628409 72 ntBASIC3.4□□□□□ -1.86
SCN4AP35499 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.86
SCN4AP35499 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms