Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC6A4P31645 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SLC6A4P31645 AC006960.3-201ENST00000561845 705 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 TPRKBP2-201ENST00000565969 475 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.72□□□□□ -1.65
SLC6A4P31645 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC6A4P31645 MIR544B-201ENST00000582372 78 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC6A4P31645 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC6A4P31645 AP002360.4-201ENST00000606980 481 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 AC008250.2-201ENST00000615261 205 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 MIR6864-201ENST00000617935 70 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC6A4P31645 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SLC6A4P31645 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC6A4P31645 OR56B2P-202ENST00000641377 2453 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC6A4P31645 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC6A4P31645 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A4P31645 SALL4P2-201ENST00000423288 2910 ntBASIC4.72□□□□□ -1.65
SLC6A4P31645 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A4P31645 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SLC6A4P31645 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
SLC6A4P31645 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SLC6A4P31645 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SLC6A4P31645 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A4P31645 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
SLC6A4P31645 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SLC6A4P31645 OR11H4-201ENST00000315409 1082 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SLC6A4P31645 RNU1-83P-201ENST00000363426 164 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 RNU6-533P-201ENST00000384144 107 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 RNU6-178P-201ENST00000384631 104 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 MTND1P21-201ENST00000412991 285 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 NANOGP6-201ENST00000429190 847 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 UBE2V1P8-201ENST00000437166 265 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 LSM1P1-201ENST00000438629 273 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC073614.1-201ENST00000438690 650 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 RABEPKP1-201ENST00000440529 1026 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 MTND5P14-201ENST00000441481 1267 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AL022238.1-201ENST00000442557 355 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AL162591.2-201ENST00000449634 317 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC239809.1-201ENST00000450470 217 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 RPS7P7-201ENST00000463499 571 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AL591473.1-201ENST00000464297 313 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC007537.2-201ENST00000472093 511 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC013356.1-201ENST00000489027 564 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC090453.1-201ENST00000495560 436 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC022483.1-201ENST00000514020 567 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A4P31645 OR5M7P-201ENST00000526140 972 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 MED28P5-201ENST00000528254 438 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 OR5AP1P-201ENST00000529730 940 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC6A4P31645 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A4P31645 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC234778.2-201ENST00000566241 354 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC137800.2-201ENST00000574375 120 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 MAGOH2P-202ENST00000584384 429 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 OR4G1P-201ENST00000588632 938 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 TPMTP1-201ENST00000592307 737 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A4P31645 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC005191.1-201ENST00000603950 358 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AL359999.1-201ENST00000604513 294 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AL513477.2-201ENST00000607858 568 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 AC072046.2-201ENST00000618366 268 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC6A4P31645 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC125257.1-201ENST00000560400 2930 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SLC6A4P31645 AC107027.3-201ENST00000565095 3473 ntBASIC4.71□□□□□ -1.66
SLC6A4P31645 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A4P31645 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A4P31645 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A4P31645 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC6A4P31645 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC6A4P31645 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC6A4P31645 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SLC6A4P31645 AC107068.1-201ENST00000563286 4218 ntBASIC4.7□□□□□ -1.66
SLC6A4P31645 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms