Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 MIR3922-201ENST00000585192 84 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 AC005332.6-201ENST00000613178 446 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AL355493.4-201ENST00000618530 292 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC068722.2-201ENST00000618734 544 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC069209.1-201ENST00000619282 651 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 MIR6075-201ENST00000620782 95 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC019226.2-201ENST00000625973 424 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 AC026634.1-201ENST00000634369 198 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 CU459211.1-201ENST00000635667 749 ntBASIC4.24□□□□□ -1.73
HOXA13P31271 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA13P31271 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA13P31271 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXA13P31271 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA13P31271 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA13P31271 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA13P31271 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 AC109315.1-201ENST00000584143 1347 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA13P31271 AL139811.1-201ENST00000424779 2299 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA13P31271 MIR449B-201ENST00000384995 97 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AL023807.1-201ENST00000407932 359 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 HIGD1AP15-201ENST00000416198 280 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 RPS3AP9-201ENST00000417027 792 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA13P31271 HMGN2P31-201ENST00000432430 273 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC073587.1-201ENST00000447093 876 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXA13P31271 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 AC022034.3-201ENST00000471393 478 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC091951.3-201ENST00000504093 246 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC008802.1-201ENST00000519121 791 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 DUXAP5-201ENST00000529668 529 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC090502.2-201ENST00000549267 280 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AL132657.2-201ENST00000564417 358 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA13P31271 BNIP3P26-201ENST00000600827 554 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC007566.2-201ENST00000603642 413 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC007349.4-201ENST00000608114 532 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC233309.1-201ENST00000619522 751 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 AC067931.1-201ENST00000624190 671 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 AC120349.3-201ENST00000624377 529 ntBASIC4.23□□□□□ -1.73
HOXA13P31271 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HOXA13P31271 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA13P31271 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HOXA13P31271 ZNF33CP-201ENST00000432492 2030 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC107982.1-201ENST00000507171 1300 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXA13P31271 SUGT1P1-201ENST00000379514 476 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 RPS12P23-201ENST00000419579 400 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC005005.2-201ENST00000420779 380 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA13P31271 AL451062.2-201ENST00000427515 271 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 USP9YP31-201ENST00000431405 881 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 RPS3AP46-201ENST00000448352 682 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 RFC5P1-201ENST00000454419 874 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA13P31271 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA13P31271 MTCYBP16-201ENST00000509187 1129 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC016065.2-201ENST00000514530 444 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 SUMO2P20-201ENST00000520803 283 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms