Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL353662.3-201ENST00000625131 237 ntBASIC6.31□□□□□ -1.4
RFX1P22670 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX1P22670 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFX1P22670 AC011493.1-201ENST00000596753 1632 ntBASIC6.31□□□□□ -1.4
RFX1P22670 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.31□□□□□ -1.4
RFX1P22670 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX1P22670 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RFX1P22670 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX1P22670 ZNF658B-201ENST00000602828 3408 ntBASIC6.31□□□□□ -1.4
RFX1P22670 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFX1P22670 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.3□□□□□ -1.4
RFX1P22670 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 BDP1P-201ENST00000582658 1990 ntBASIC6.3□□□□□ -1.4
RFX1P22670 TAB3P1-202ENST00000452645 1634 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 Y_RNA.138-201ENST00000363462 102 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RNU6-960P-201ENST00000364056 120 ntBASIC6.3□□□□□ -1.4
RFX1P22670 SNORA62.1-201ENST00000364287 154 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RNU6-821P-201ENST00000390995 107 ntBASIC6.3□□□□□ -1.4
RFX1P22670 OR6C66P-201ENST00000414917 930 ntBASIC6.3□□□□□ -1.4
RFX1P22670 HSPE1P1-201ENST00000421494 318 ntBASIC6.3□□□□□ -1.4
RFX1P22670 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX1P22670 AC236972.2-201ENST00000434979 310 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX1P22670 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX1P22670 AC005094.1-201ENST00000440420 368 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC023141.8-201ENST00000442554 208 ntBASIC6.3□□□□□ -1.4
RFX1P22670 PPP1R2P5-201ENST00000457256 603 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RPS29P15-201ENST00000458329 171 ntBASIC6.3□□□□□ -1.4
RFX1P22670 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX1P22670 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX1P22670 AC135721.1-201ENST00000497954 479 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC092436.1-201ENST00000506450 503 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC105384.2-201ENST00000508433 640 ntBASIC6.3□□□□□ -1.4
RFX1P22670 FAM206BP-201ENST00000510179 541 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RNA5SP34-201ENST00000516887 130 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RN7SKP116-201ENST00000516902 319 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RN7SKP99-201ENST00000517028 307 ntBASIC6.3□□□□□ -1.4
RFX1P22670 RNU6-64P-201ENST00000517119 105 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC100870.1-201ENST00000522035 505 ntBASIC6.3□□□□□ -1.4
RFX1P22670 FAM60DP-201ENST00000524174 632 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX1P22670 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX1P22670 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX1P22670 NCAPGP2-201ENST00000557911 754 ntBASIC6.3□□□□□ -1.4
RFX1P22670 AC026464.5-201ENST00000562497 722 ntBASIC6.3□□□□□ -1.4
RFX1P22670 MIR4703-201ENST00000577728 79 ntBASIC6.3□□□□□ -1.4
RFX1P22670 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX1P22670 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.3□□□□□ -1.4
RFX1P22670 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 MIR6809-201ENST00000612189 116 ntBASIC6.3□□□□□ -1.4
RFX1P22670 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.3□□□□□ -1.4
RFX1P22670 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFX1P22670 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
RFX1P22670 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 EIF2AP4-201ENST00000424793 1781 ntBASIC6.29□□□□□ -1.4
RFX1P22670 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
RFX1P22670 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 U3.10-201ENST00000364459 214 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RNU4-66P-201ENST00000365199 138 ntBASIC6.29□□□□□ -1.4
RFX1P22670 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 RNU6-637P-201ENST00000384050 107 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RNU6-432P-201ENST00000384196 109 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RNU6-831P-201ENST00000384548 107 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RNU4-34P-201ENST00000410431 124 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AL451054.2-201ENST00000420896 202 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AL353729.1-201ENST00000425044 720 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AC126120.1-201ENST00000431082 470 ntBASIC6.29□□□□□ -1.4
RFX1P22670 ZNF33CP-201ENST00000432492 2030 ntBASIC6.29□□□□□ -1.4
RFX1P22670 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.29□□□□□ -1.4
RFX1P22670 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX1P22670 AC012512.1-201ENST00000446594 718 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RPL12P39-201ENST00000455456 496 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AC096576.1-201ENST00000489014 359 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RN7SL466P-201ENST00000497546 295 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AC025470.1-201ENST00000510053 2032 ntBASIC6.29□□□□□ -1.4
RFX1P22670 BX510359.5-201ENST00000515651 304 ntBASIC6.29□□□□□ -1.4
RFX1P22670 RNA5SP503-201ENST00000517047 117 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 AC136777.2-201ENST00000522979 358 ntBASIC6.29□□□□□ -1.4
RFX1P22670 PCNAP4-201ENST00000532690 730 ntBASIC6.29□□□□□ -1.4
RFX1P22670 OR5B10P-201ENST00000532869 642 ntBASIC6.29□□□□□ -1.4
RFX1P22670 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms