Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL035660.1-201ENST00000422041 222 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.82□□□□□ -1.48
NFKB1P19838 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 RPL7P52-201ENST00000449200 742 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AL162395.1-201ENST00000457882 422 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 RPS23P2-201ENST00000463671 415 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC009120.1-201ENST00000493458 473 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC005726.1-201ENST00000494679 427 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC074255.1-201ENST00000511259 501 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC009812.2-201ENST00000517657 457 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 HMGB1P41-201ENST00000520234 440 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 NRBF2P4-201ENST00000520874 850 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC100784.1-201ENST00000522790 310 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 AC138761.3-201ENST00000579993 334 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 MIR5583-1-201ENST00000580941 59 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.82□□□□□ -1.48
NFKB1P19838 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 NANOGP3-201ENST00000605855 286 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC133644.2-201ENST00000608142 540 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.82□□□□□ -1.48
NFKB1P19838 AL669831.3-213ENST00000636676 183 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 PNPT1P2-201ENST00000456768 2050 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AC244517.1-201ENST00000606030 2086 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
NFKB1P19838 API5P2-201ENST00000397055 1498 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 AC025470.1-201ENST00000510053 2032 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.81□□□□□ -1.48
NFKB1P19838 RNU6-511P-201ENST00000363496 107 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 Y_RNA.252-201ENST00000364556 101 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 AC068533.1-201ENST00000418542 415 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 ATG3P1-201ENST00000419507 911 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.81□□□□□ -1.48
NFKB1P19838 SUMO1P3-201ENST00000439961 304 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 RPL21P133-201ENST00000443666 476 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 CBX1P2-201ENST00000453841 458 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AC004801.2-202ENST00000463559 283 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AC128713.1-201ENST00000471495 306 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 SIAH1P1-201ENST00000479411 923 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 ATP5LP5-201ENST00000483050 299 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 RN7SL570P-201ENST00000484405 292 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AC015911.1-201ENST00000495111 156 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.81□□□□□ -1.48
NFKB1P19838 RNU6-1213P-201ENST00000517075 94 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.81□□□□□ -1.48
NFKB1P19838 DEFB109D-201ENST00000529497 240 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.81□□□□□ -1.48
NFKB1P19838 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.81□□□□□ -1.48
NFKB1P19838 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.81□□□□□ -1.48
NFKB1P19838 COX6CP7-201ENST00000597056 208 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 AL008729.2-201ENST00000606393 473 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 AC130650.2-201ENST00000618736 2403 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NFKB1P19838 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.81□□□□□ -1.48
NFKB1P19838 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 AL121839.2-201ENST00000565058 6943 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NFKB1P19838 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
NFKB1P19838 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NFKB1P19838 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NFKB1P19838 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.8□□□□□ -1.48
NFKB1P19838 MTND5P30-201ENST00000452896 1731 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NFKB1P19838 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NFKB1P19838 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NFKB1P19838 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
NFKB1P19838 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms