Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.14□□□□□ -1.75
PCNAP12004 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCNAP12004 AL022161.1-201ENST00000604390 213 ntBASIC4.14□□□□□ -1.75
PCNAP12004 AL049634.3-201ENST00000604968 457 ntBASIC4.14□□□□□ -1.75
PCNAP12004 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.14□□□□□ -1.75
PCNAP12004 AC024560.3-201ENST00000608482 349 ntBASIC4.14□□□□□ -1.75
PCNAP12004 AC099669.2-201ENST00000616549 437 ntBASIC4.14□□□□□ -1.75
PCNAP12004 AC007546.1-201ENST00000619452 559 ntBASIC4.14□□□□□ -1.75
PCNAP12004 AP000346.3-201ENST00000622821 210 ntBASIC4.14□□□□□ -1.75
PCNAP12004 AC079228.1-201ENST00000624774 1049 ntBASIC4.14□□□□□ -1.75
PCNAP12004 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCNAP12004 AC140479.6-201ENST00000633535 357 ntBASIC4.14□□□□□ -1.75
PCNAP12004 U6.101-201ENST00000637707 76 ntBASIC4.14□□□□□ -1.75
PCNAP12004 FAM157B-203ENST00000639350 358 ntBASIC4.14□□□□□ -1.75
PCNAP12004 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.14□□□□□ -1.75
PCNAP12004 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
PCNAP12004 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCNAP12004 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PCNAP12004 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCNAP12004 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PCNAP12004 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 EIF2AP4-201ENST00000424793 1781 ntBASIC4.13□□□□□ -1.75
PCNAP12004 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PCNAP12004 AL121972.1-201ENST00000402023 252 ntBASIC4.13□□□□□ -1.75
PCNAP12004 SNORA11F-201ENST00000408237 128 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AL133384.1-201ENST00000412744 351 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 AL953862.1-201ENST00000423016 168 ntBASIC4.13□□□□□ -1.75
PCNAP12004 RBMY1KP-201ENST00000423480 476 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AL035410.1-201ENST00000427409 427 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 MTND2P19-201ENST00000449129 1012 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC097262.1-201ENST00000452559 548 ntBASIC4.13□□□□□ -1.75
PCNAP12004 RPS29P33-201ENST00000456717 146 ntBASIC4.13□□□□□ -1.75
PCNAP12004 snoU13.1-201ENST00000459157 104 ntBASIC4.13□□□□□ -1.75
PCNAP12004 RN7SL98P-201ENST00000462271 300 ntBASIC4.13□□□□□ -1.75
PCNAP12004 RN7SL738P-201ENST00000470264 297 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 RPS29P22-201ENST00000472363 168 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC072039.1-201ENST00000477611 581 ntBASIC4.13□□□□□ -1.75
PCNAP12004 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 TMEM251P1-201ENST00000503717 318 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.13□□□□□ -1.75
PCNAP12004 MTND1P22-201ENST00000510572 951 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC026412.2-201ENST00000512270 1075 ntBASIC4.13□□□□□ -1.75
PCNAP12004 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
PCNAP12004 RNU6-150P-201ENST00000516237 95 ntBASIC4.13□□□□□ -1.75
PCNAP12004 Vault.1-201ENST00000516474 102 ntBASIC4.13□□□□□ -1.75
PCNAP12004 RN7SKP82-201ENST00000516786 223 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC104986.1-201ENST00000517978 436 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 OR5M7P-201ENST00000526140 972 ntBASIC4.13□□□□□ -1.75
PCNAP12004 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 MIR4644-201ENST00000579929 84 ntBASIC4.13□□□□□ -1.75
PCNAP12004 KPNA2P3-201ENST00000584190 848 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC020914.6-201ENST00000594327 272 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC245008.1-201ENST00000608123 476 ntBASIC4.13□□□□□ -1.75
PCNAP12004 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.13□□□□□ -1.75
PCNAP12004 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.13□□□□□ -1.75
PCNAP12004 AC023043.4-201ENST00000612081 449 ntBASIC4.13□□□□□ -1.75
PCNAP12004 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.13□□□□□ -1.75
PCNAP12004 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PCNAP12004 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.13□□□□□ -1.75
PCNAP12004 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.13□□□□□ -1.75
PCNAP12004 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 AC130650.2-201ENST00000618736 2403 ntBASIC4.13□□□□□ -1.75
PCNAP12004 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PCNAP12004 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
PCNAP12004 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCNAP12004 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.12□□□□□ -1.75
PCNAP12004 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 LINC02471-203ENST00000641941 4752 ntBASIC4.12□□□□□ -1.75
PCNAP12004 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCNAP12004 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCNAP12004 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCNAP12004 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.75
PCNAP12004 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCNAP12004 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.12□□□□□ -1.75
PCNAP12004 RNU6-660P-201ENST00000364566 109 ntBASIC4.12□□□□□ -1.75
PCNAP12004 DHFRP6-201ENST00000401776 268 ntBASIC4.12□□□□□ -1.75
PCNAP12004 RPL37P18-201ENST00000411602 243 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 OR8G2P-201ENST00000412796 908 ntBASIC4.12□□□□□ -1.75
PCNAP12004 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms