Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC020923.1-201ENST00000624021 917 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 AC079228.1-201ENST00000624774 1049 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 AC009093.8-201ENST00000641769 292 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
CXCL1P09341 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL1P09341 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL1P09341 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL1P09341 PABPC1P7-201ENST00000413177 1513 ntBASIC2.32□□□□□ -2.04
CXCL1P09341 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL1P09341 OR1S2-201ENST00000302592 978 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC126755.2-208ENST00000327792 462 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC138969.1-213ENST00000331436 462 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 SNORA70.2-201ENST00000364506 135 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AL359837.1-201ENST00000381357 287 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 DEFB109C-201ENST00000382575 264 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 DEFB109B-201ENST00000382656 264 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CXCL1P09341 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL1P09341 RPL21P75-201ENST00000396599 483 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RPL21P28-201ENST00000401418 483 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AL592114.1-201ENST00000403842 483 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RAD23BP2-201ENST00000416003 1207 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL1P09341 AL160175.1-201ENST00000428124 247 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC127537.2-201ENST00000439258 465 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.31□□□□□ -2.04
CXCL1P09341 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.31□□□□□ -2.04
CXCL1P09341 RPL34P26-201ENST00000445636 354 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CXCL1P09341 NPM1P13-201ENST00000452663 865 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RPS24P6-201ENST00000452670 400 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 C1DP3-201ENST00000455013 423 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 snoU13.7-201ENST00000459220 104 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RPL21P39-201ENST00000463605 483 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC011979.1-201ENST00000472300 483 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AL136126.1-201ENST00000473603 402 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RPL21P93-201ENST00000480465 489 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC233702.1-201ENST00000482905 502 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC093591.1-201ENST00000491435 481 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RPL21P129-201ENST00000491732 478 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RPL21P16-201ENST00000495531 483 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 HPRT1P1-201ENST00000509498 657 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL1P09341 RNA5SP468-201ENST00000516782 93 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL1P09341 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.31□□□□□ -2.04
CXCL1P09341 MIR2682-201ENST00000580305 110 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 RN7SL339P-201ENST00000580597 296 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.31□□□□□ -2.04
CXCL1P09341 BDH2P1-201ENST00000602288 736 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 AF230666.2-201ENST00000602328 725 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 U6.48-201ENST00000618523 106 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.31□□□□□ -2.04
CXCL1P09341 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL1P09341 ZNF37BP-203ENST00000452306 1352 ntBASIC2.31□□□□□ -2.04
CXCL1P09341 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL1P09341 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL1P09341 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL1P09341 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CXCL1P09341 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
CXCL1P09341 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL1P09341 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL1P09341 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CXCL1P09341 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CXCL1P09341 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RPL32P3-201ENST00000359025 275 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 VTRNA1-1-201ENST00000363120 99 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC068538.1-201ENST00000376856 336 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RNU6-1181P-201ENST00000384191 106 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RNU6-452P-201ENST00000384406 107 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RNU1-101P-201ENST00000391171 127 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 MIR937-201ENST00000401271 86 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RPL7P25-201ENST00000404151 721 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RNU4-65P-201ENST00000410473 140 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RNU6-1077P-201ENST00000410506 102 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RPL19P1-201ENST00000411635 428 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC233728.2-201ENST00000425348 757 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RSL24D1P6-201ENST00000426934 401 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC005189.1-201ENST00000431286 310 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL1P09341 AC073063.1-201ENST00000434352 607 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 Z99714.1-201ENST00000450463 807 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC104689.1-201ENST00000473356 768 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC025518.1-201ENST00000479856 347 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC106707.2-201ENST00000484182 374 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RPL7P38-201ENST00000488396 739 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 HSPD1P15-201ENST00000505573 1122 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL1P09341 AC104619.4-201ENST00000510773 249 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.3□□□□□ -2.04
CXCL1P09341 RNU6-56P-201ENST00000516986 93 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 RNU6-711P-201ENST00000517255 106 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.3□□□□□ -2.04
CXCL1P09341 AP004371.1-201ENST00000525240 214 ntBASIC2.3□□□□□ -2.04
CXCL1P09341 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CXCL1P09341 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.3□□□□□ -2.04
CXCL1P09341 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.3□□□□□ -2.04
CXCL1P09341 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms