Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.48□□□□□ -2.01
SPTA1P02549 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.48□□□□□ -2.01
SPTA1P02549 OR1AB1P-201ENST00000585564 761 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.48□□□□□ -2.01
SPTA1P02549 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SPTA1P02549 ADAM3A-203ENST00000461344 2157 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SPTA1P02549 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
SPTA1P02549 RNA5SP322-201ENST00000363617 119 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 SKINT1L-201ENST00000401057 817 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 NDUFA5P4-201ENST00000436704 385 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.48□□□□□ -2.01
SPTA1P02549 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SPTA1P02549 AC006445.2-201ENST00000510061 472 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.48□□□□□ -2.01
SPTA1P02549 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.48□□□□□ -2.01
SPTA1P02549 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SPTA1P02549 MIR3605-201ENST00000583214 100 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.48□□□□□ -2.01
SPTA1P02549 AL122125.1-201ENST00000616999 600 ntBASIC2.48□□□□□ -2.01
SPTA1P02549 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SPTA1P02549 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SPTA1P02549 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.47□□□□□ -2.01
SPTA1P02549 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 RPS6P2-201ENST00000454208 705 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 AP001025.2-201ENST00000490908 477 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AC091917.2-201ENST00000505002 744 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 MIR4738-201ENST00000579134 87 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AP000919.1-202ENST00000581139 1264 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SPTA1P02549 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.47□□□□□ -2.01
SPTA1P02549 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.47□□□□□ -2.01
SPTA1P02549 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SPTA1P02549 GAPDHP39-201ENST00000481866 979 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 AL390334.1-201ENST00000556395 450 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.47□□□□□ -2.01
SPTA1P02549 NRBF2P1-201ENST00000587407 859 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
SPTA1P02549 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.47□□□□□ -2.01
SPTA1P02549 AC091903.1-201ENST00000624322 454 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.47□□□□□ -2.01
SPTA1P02549 OR10AB1P-202ENST00000641219 1686 ntBASIC2.47□□□□□ -2.01
SPTA1P02549 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SPTA1P02549 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.46□□□□□ -2.01
SPTA1P02549 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.46□□□□□ -2.01
SPTA1P02549 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.46□□□□□ -2.02
SPTA1P02549 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SPTA1P02549 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SPTA1P02549 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SPTA1P02549 AL590084.1-201ENST00000407885 387 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 RPS20P5-201ENST00000434808 360 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 RPL23AP15-201ENST00000450202 459 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.46□□□□□ -2.02
SPTA1P02549 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SPTA1P02549 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.46□□□□□ -2.02
SPTA1P02549 AC244517.3-201ENST00000616254 1235 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SPTA1P02549 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.46□□□□□ -2.02
SPTA1P02549 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SPTA1P02549 AL049555.1-201ENST00000562834 1933 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SPTA1P02549 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SPTA1P02549 MIR613-201ENST00000385248 95 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.46□□□□□ -2.02
SPTA1P02549 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SPTA1P02549 OR2AS1P-201ENST00000427827 319 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 BX679664.1-201ENST00000434429 253 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 HMGB1P15-201ENST00000453854 435 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.46□□□□□ -2.02
SPTA1P02549 OR5H5P-201ENST00000503164 928 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.46□□□□□ -2.02
SPTA1P02549 SEC11B-201ENST00000518383 499 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 TGIF1P1-201ENST00000558095 802 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.46□□□□□ -2.02
SPTA1P02549 AC079228.1-201ENST00000624774 1049 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 PISRT1-201ENST00000626175 531 ntBASIC2.46□□□□□ -2.02
SPTA1P02549 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SPTA1P02549 AL035425.3-201ENST00000564206 4996 ntBASIC2.45□□□□□ -2.02
SPTA1P02549 AL359715.4-201ENST00000606629 1436 ntBASIC2.45□□□□□ -2.02
SPTA1P02549 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.45□□□□□ -2.02
SPTA1P02549 SNORD114-26-201ENST00000363543 72 ntBASIC2.45□□□□□ -2.02
SPTA1P02549 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.45□□□□□ -2.02
SPTA1P02549 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.45□□□□□ -2.02
SPTA1P02549 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.45□□□□□ -2.02
SPTA1P02549 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms