Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
PDGFBP01127 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC107954.1-201ENST00000565906 727 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.8□□□□□ -1.8
PDGFBP01127 SLC25A36P1-201ENST00000590111 465 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC113368.1-201ENST00000603736 382 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 Z82195.1-201ENST00000604558 398 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC024933.1-201ENST00000608472 348 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AP000255.1-201ENST00000610276 676 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC048347.1-201ENST00000624621 427 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 USP8P1-201ENST00000494673 3183 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 ZNF962P-201ENST00000443465 3140 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AL353743.1-202ENST00000431724 1695 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PDGFBP01127 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 MIR199A2-201ENST00000385289 110 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 TAF9BP1-201ENST00000396646 746 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 MTCO3P31-201ENST00000405526 789 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 TAF13P2-201ENST00000416876 286 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 MTND2P16-201ENST00000419987 799 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 RPP40P1-201ENST00000426762 456 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC114973.1-201ENST00000429057 632 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC087650.1-201ENST00000431445 468 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.79□□□□□ -1.8
PDGFBP01127 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 NIFKP8-201ENST00000560500 874 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFBP01127 LARP7P3-201ENST00000579888 337 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC090330.1-201ENST00000588646 764 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 AC025946.2-201ENST00000603398 234 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 AC084824.4-201ENST00000620106 731 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 MIR7702-201ENST00000621931 59 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 AL445984.1-201ENST00000637834 659 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFBP01127 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PDGFBP01127 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PDGFBP01127 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PDGFBP01127 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
PDGFBP01127 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFBP01127 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PDGFBP01127 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PDGFBP01127 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PDGFBP01127 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 RNA5SP374-201ENST00000362939 125 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 RNU6-374P-201ENST00000364146 108 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PDGFBP01127 MIR649-201ENST00000384843 97 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PDGFBP01127 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 RN7SKP284-201ENST00000411002 343 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFBP01127 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFBP01127 ATP5JP1-201ENST00000431631 322 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 ELOCP18-201ENST00000434209 337 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFBP01127 AC000041.1-201ENST00000439655 175 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFBP01127 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFBP01127 RPL21P104-201ENST00000464143 478 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 PRDX3P4-201ENST00000470828 747 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC096576.1-201ENST00000489014 359 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFBP01127 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFBP01127 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 MTCYBP41-201ENST00000528913 1123 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC006518.1-201ENST00000541449 943 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC006518.2-201ENST00000542513 940 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms