Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.59□□□□□ -2
SNRNP200O75643 AL645937.1-202ENST00000421799 937 ntBASIC2.59□□□□□ -2
SNRNP200O75643 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.59□□□□□ -2
SNRNP200O75643 AL662791.1-201ENST00000441992 928 ntBASIC2.59□□□□□ -2
SNRNP200O75643 RN7SL432P-201ENST00000484057 298 ntBASIC2.59□□□□□ -2
SNRNP200O75643 AC005921.1-201ENST00000510589 286 ntBASIC2.59□□□□□ -2
SNRNP200O75643 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.59□□□□□ -2
SNRNP200O75643 AC055876.1-202ENST00000567053 138 ntBASIC2.59□□□□□ -2
SNRNP200O75643 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.59□□□□□ -2
SNRNP200O75643 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.59□□□□□ -2
SNRNP200O75643 AC231759.1-201ENST00000616455 597 ntBASIC2.59□□□□□ -2
SNRNP200O75643 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.59□□□□□ -2
SNRNP200O75643 AL590240.3-201ENST00000621416 943 ntBASIC2.59□□□□□ -2
SNRNP200O75643 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.59□□□□□ -2
SNRNP200O75643 GABPAP-201ENST00000419271 1356 ntBASIC2.58□□□□□ -2
SNRNP200O75643 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.58□□□□□ -2
SNRNP200O75643 MIR181A2-201ENST00000384863 110 ntBASIC2.58□□□□□ -2
SNRNP200O75643 MTCO1P39-201ENST00000426148 480 ntBASIC2.58□□□□□ -2
SNRNP200O75643 AL513043.1-201ENST00000439124 535 ntBASIC2.58□□□□□ -2
SNRNP200O75643 SNORD108-201ENST00000459332 71 ntBASIC2.58□□□□□ -2
SNRNP200O75643 POU5F1P7-201ENST00000508759 541 ntBASIC2.58□□□□□ -2
SNRNP200O75643 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
SNRNP200O75643 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.58□□□□□ -2
SNRNP200O75643 AL512310.1-201ENST00000548639 172 ntBASIC2.58□□□□□ -2
SNRNP200O75643 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.58□□□□□ -2
SNRNP200O75643 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
SNRNP200O75643 AC007687.1-201ENST00000602704 304 ntBASIC2.58□□□□□ -2
SNRNP200O75643 AC006023.1-201ENST00000603944 259 ntBASIC2.58□□□□□ -2
SNRNP200O75643 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SNRNP200O75643 XIST_intron.1-201ENST00000619444 68 ntBASIC2.58□□□□□ -2
SNRNP200O75643 MIR4278-201ENST00000636094 69 ntBASIC2.58□□□□□ -2
SNRNP200O75643 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SNRNP200O75643 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNRNP200O75643 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
SNRNP200O75643 RPS4XP8-201ENST00000402039 771 ntBASIC2.57□□□□□ -2
SNRNP200O75643 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.57□□□□□ -2
SNRNP200O75643 RPL21P8-201ENST00000465083 535 ntBASIC2.57□□□□□ -2
SNRNP200O75643 AC016687.1-201ENST00000482574 353 ntBASIC2.57□□□□□ -2
SNRNP200O75643 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.57□□□□□ -2
SNRNP200O75643 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.57□□□□□ -2
SNRNP200O75643 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.57□□□□□ -2
SNRNP200O75643 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNRNP200O75643 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SNRNP200O75643 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.57□□□□□ -2
SNRNP200O75643 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.57□□□□□ -2
SNRNP200O75643 SNORA31-201ENST00000362607 130 ntBASIC2.57□□□□□ -2
SNRNP200O75643 AC008280.2-201ENST00000455473 307 ntBASIC2.57□□□□□ -2
SNRNP200O75643 RPL23AP31-201ENST00000456160 467 ntBASIC2.57□□□□□ -2
SNRNP200O75643 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.57□□□□□ -2
SNRNP200O75643 AC107016.2-201ENST00000547968 190 ntBASIC2.57□□□□□ -2
SNRNP200O75643 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.57□□□□□ -2
SNRNP200O75643 AC009163.5-201ENST00000575421 637 ntBASIC2.57□□□□□ -2
SNRNP200O75643 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.57□□□□□ -2
SNRNP200O75643 MTCO3P22-201ENST00000603219 784 ntBASIC2.57□□□□□ -2
SNRNP200O75643 AC096947.1-201ENST00000603233 470 ntBASIC2.57□□□□□ -2
SNRNP200O75643 MIR6852-201ENST00000621699 66 ntBASIC2.57□□□□□ -2
SNRNP200O75643 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNRNP200O75643 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.57□□□□□ -2
SNRNP200O75643 AC092435.3-201ENST00000565538 3654 ntBASIC2.57□□□□□ -2
SNRNP200O75643 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.57□□□□□ -2
SNRNP200O75643 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNRNP200O75643 AF127577.6-201ENST00000623352 2191 ntBASIC2.56□□□□□ -2
SNRNP200O75643 ANKRD36P1-201ENST00000344424 659 ntBASIC2.56□□□□□ -2
SNRNP200O75643 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.56□□□□□ -2
SNRNP200O75643 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.56□□□□□ -2
SNRNP200O75643 HMGB3P30-201ENST00000457863 606 ntBASIC2.56□□□□□ -2
SNRNP200O75643 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.56□□□□□ -2
SNRNP200O75643 TRAV31-201ENST00000502780 342 ntBASIC2.56□□□□□ -2
SNRNP200O75643 MTND5P21-201ENST00000531961 522 ntBASIC2.56□□□□□ -2
SNRNP200O75643 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.56□□□□□ -2
SNRNP200O75643 BNIP3P19-201ENST00000605397 577 ntBASIC2.56□□□□□ -2
SNRNP200O75643 AC016542.2-201ENST00000624201 619 ntBASIC2.56□□□□□ -2
SNRNP200O75643 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.56□□□□□ -2
SNRNP200O75643 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNRNP200O75643 UBE2V1P2-201ENST00000397758 440 ntBASIC2.56□□□□□ -2
SNRNP200O75643 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
SNRNP200O75643 USP9YP31-201ENST00000431405 881 ntBASIC2.56□□□□□ -2
SNRNP200O75643 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.56□□□□□ -2
SNRNP200O75643 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.56□□□□□ -2
SNRNP200O75643 AC093663.2-201ENST00000484625 313 ntBASIC2.56□□□□□ -2
SNRNP200O75643 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.56□□□□□ -2
SNRNP200O75643 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.56□□□□□ -2
SNRNP200O75643 AC138761.3-201ENST00000579993 334 ntBASIC2.56□□□□□ -2
SNRNP200O75643 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNRNP200O75643 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.56□□□□□ -2
SNRNP200O75643 AC096586.2-201ENST00000610260 441 ntBASIC2.56□□□□□ -2
SNRNP200O75643 AC092628.2-201ENST00000622492 339 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms