Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.1□□□□□ -1.91
CTNSO60931 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNSO60931 AC074250.1-201ENST00000511117 192 ntBASIC3.1□□□□□ -1.91
CTNSO60931 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.1□□□□□ -1.91
CTNSO60931 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
CTNSO60931 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.1□□□□□ -1.91
CTNSO60931 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNSO60931 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.1□□□□□ -1.91
CTNSO60931 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNSO60931 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 AC093014.1-201ENST00000548926 724 ntBASIC3.1□□□□□ -1.91
CTNSO60931 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNSO60931 AC025918.2-201ENST00000558683 763 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.1□□□□□ -1.91
CTNSO60931 AC037471.2-201ENST00000564941 598 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNSO60931 MIR4474-201ENST00000579189 78 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC005412.1-201ENST00000580812 1049 ntBASIC3.1□□□□□ -1.91
CTNSO60931 MIR3944-201ENST00000581277 108 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC008507.1-201ENST00000587506 734 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC125494.3-201ENST00000602759 455 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC135178.6-201ENST00000605314 398 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC073657.2-201ENST00000605661 303 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AL451074.6-201ENST00000608512 729 ntBASIC3.1□□□□□ -1.91
CTNSO60931 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 AL356490.1-201ENST00000623079 479 ntBASIC3.1□□□□□ -1.91
CTNSO60931 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTNSO60931 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTNSO60931 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CTNSO60931 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.1□□□□□ -1.91
CTNSO60931 AC046144.1-201ENST00000478559 1853 ntBASIC3.09□□□□□ -1.91
CTNSO60931 MTCO1P24-201ENST00000515438 1558 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AL512646.1-201ENST00000269395 1077 ntBASIC3.09□□□□□ -1.91
CTNSO60931 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTNSO60931 BTBD10P2-201ENST00000404779 676 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTNSO60931 AC023128.2-201ENST00000420880 1223 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AL158156.1-201ENST00000422509 473 ntBASIC3.09□□□□□ -1.91
CTNSO60931 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTNSO60931 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNSO60931 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNSO60931 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.09□□□□□ -1.91
CTNSO60931 RPS4XP10-201ENST00000465034 731 ntBASIC3.09□□□□□ -1.91
CTNSO60931 PLGLA-201ENST00000465668 449 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC091153.1-201ENST00000466297 402 ntBASIC3.09□□□□□ -1.91
CTNSO60931 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTNSO60931 RPL7P49-201ENST00000471402 708 ntBASIC3.09□□□□□ -1.91
CTNSO60931 RPS27AP1-201ENST00000475545 471 ntBASIC3.09□□□□□ -1.91
CTNSO60931 RPL7P38-201ENST00000488396 739 ntBASIC3.09□□□□□ -1.91
CTNSO60931 HSPD1P15-201ENST00000505573 1122 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNSO60931 TMEM248P1-201ENST00000510579 951 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNSO60931 FABP5P12-201ENST00000515543 389 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC103833.1-201ENST00000517442 172 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNSO60931 SYF2P1-201ENST00000550658 413 ntBASIC3.09□□□□□ -1.91
CTNSO60931 HIGD1AP1-201ENST00000550979 275 ntBASIC3.09□□□□□ -1.91
CTNSO60931 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.09□□□□□ -1.91
CTNSO60931 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNSO60931 BNIP3P33-201ENST00000598912 569 ntBASIC3.09□□□□□ -1.91
CTNSO60931 CKS1BP3-201ENST00000600888 237 ntBASIC3.09□□□□□ -1.91
CTNSO60931 STMN1P1-201ENST00000617809 440 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC024595.1-201ENST00000623088 387 ntBASIC3.09□□□□□ -1.91
CTNSO60931 AC004777.1-201ENST00000624317 287 ntBASIC3.09□□□□□ -1.91
CTNSO60931 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTNSO60931 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.09□□□□□ -1.92
CTNSO60931 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CTNSO60931 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CTNSO60931 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CTNSO60931 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CTNSO60931 AC117529.2-201ENST00000512159 2068 ntBASIC3.08□□□□□ -1.92
CTNSO60931 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.08□□□□□ -1.92
CTNSO60931 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
CTNSO60931 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTNSO60931 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTNSO60931 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
CTNSO60931 SNORA51.12-201ENST00000384448 134 ntBASIC3.08□□□□□ -1.92
CTNSO60931 U3.19-201ENST00000390893 196 ntBASIC3.08□□□□□ -1.92
CTNSO60931 AL356057.1-202ENST00000402263 756 ntBASIC3.08□□□□□ -1.92
CTNSO60931 AL355379.1-201ENST00000405542 640 ntBASIC3.08□□□□□ -1.92
CTNSO60931 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
CTNSO60931 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.08□□□□□ -1.92
CTNSO60931 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.08□□□□□ -1.92
CTNSO60931 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.08□□□□□ -1.92
CTNSO60931 AL451062.2-201ENST00000427515 271 ntBASIC3.08□□□□□ -1.92
CTNSO60931 ETF1P3-201ENST00000430422 1160 ntBASIC3.08□□□□□ -1.92
CTNSO60931 RPL21P112-201ENST00000434403 463 ntBASIC3.08□□□□□ -1.92
CTNSO60931 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.08□□□□□ -1.92
CTNSO60931 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.08□□□□□ -1.92
CTNSO60931 MRPL35P4-201ENST00000453682 566 ntBASIC3.08□□□□□ -1.92
CTNSO60931 RPL21P104-201ENST00000464143 478 ntBASIC3.08□□□□□ -1.92
CTNSO60931 RPL21P8-201ENST00000465083 535 ntBASIC3.08□□□□□ -1.92
CTNSO60931 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
CTNSO60931 AC110794.1-201ENST00000505816 425 ntBASIC3.08□□□□□ -1.92
CTNSO60931 AC008565.1-201ENST00000509046 885 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms