Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL157770.1-201ENST00000623049 439 ntBASIC3.82□□□□□ -1.8
RTCAO00442 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.81□□□□□ -1.8
RTCAO00442 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 RNA5SP443-201ENST00000363083 132 ntBASIC3.81□□□□□ -1.8
RTCAO00442 SNORA70C-201ENST00000384538 135 ntBASIC3.81□□□□□ -1.8
RTCAO00442 Y_RNA.578-201ENST00000390903 88 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AL024474.1-201ENST00000404655 591 ntBASIC3.81□□□□□ -1.8
RTCAO00442 RPL21P65-201ENST00000406094 466 ntBASIC3.81□□□□□ -1.8
RTCAO00442 RNA5SP317-201ENST00000410176 116 ntBASIC3.81□□□□□ -1.8
RTCAO00442 RNA5SP311-201ENST00000411290 116 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 Z75741.2-201ENST00000417272 1167 ntBASIC3.81□□□□□ -1.8
RTCAO00442 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 AC005345.1-201ENST00000431868 217 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.81□□□□□ -1.8
RTCAO00442 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 TPT1P12-201ENST00000448968 492 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AL009048.1-201ENST00000450437 298 ntBASIC3.81□□□□□ -1.8
RTCAO00442 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 RPS7P7-201ENST00000463499 571 ntBASIC3.81□□□□□ -1.8
RTCAO00442 RN7SL860P-201ENST00000473738 223 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC069528.1-202ENST00000482888 637 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 AC134050.1-201ENST00000495088 933 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 RNA5SP315-201ENST00000516340 116 ntBASIC3.81□□□□□ -1.8
RTCAO00442 RNA5SP312-201ENST00000517068 116 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
RTCAO00442 MTCYBP23-201ENST00000558717 1102 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC087481.2-201ENST00000565492 330 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.81□□□□□ -1.8
RTCAO00442 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 RNU4-5P-201ENST00000607255 135 ntBASIC3.81□□□□□ -1.8
RTCAO00442 RNU4-89P-201ENST00000607443 133 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC106052.1-201ENST00000608029 497 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AP000238.1-201ENST00000608759 426 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AP005137.2-201ENST00000609238 400 ntBASIC3.81□□□□□ -1.8
RTCAO00442 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 AC087821.2-201ENST00000637086 450 ntBASIC3.81□□□□□ -1.8
RTCAO00442 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 MFSD8-245ENST00000641743 948 ntBASIC3.81□□□□□ -1.8
RTCAO00442 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
RTCAO00442 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCAO00442 NUP58P1-201ENST00000502546 1738 ntBASIC3.81□□□□□ -1.8
RTCAO00442 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTCAO00442 AL049780.3-201ENST00000624612 1583 ntBASIC3.8□□□□□ -1.8
RTCAO00442 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
RTCAO00442 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RTCAO00442 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTCAO00442 AC021755.1-201ENST00000559747 1447 ntBASIC3.8□□□□□ -1.8
RTCAO00442 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.8□□□□□ -1.8
RTCAO00442 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTCAO00442 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTCAO00442 GDI2P1-201ENST00000429312 1336 ntBASIC3.8□□□□□ -1.8
RTCAO00442 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTCAO00442 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTCAO00442 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTCAO00442 RNU6-839P-201ENST00000363347 108 ntBASIC3.8□□□□□ -1.8
RTCAO00442 RNA5SP399-201ENST00000364003 117 ntBASIC3.8□□□□□ -1.8
RTCAO00442 ANAPC10P1-201ENST00000395991 556 ntBASIC3.8□□□□□ -1.8
RTCAO00442 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AL590704.1-201ENST00000402856 794 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AL591034.1-201ENST00000407447 340 ntBASIC3.8□□□□□ -1.8
RTCAO00442 RNA5SP104-201ENST00000410989 118 ntBASIC3.8□□□□□ -1.8
RTCAO00442 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.8□□□□□ -1.8
RTCAO00442 AL449283.1-202ENST00000418249 604 ntBASIC3.8□□□□□ -1.8
RTCAO00442 OR1AA1P-201ENST00000419597 916 ntBASIC3.8□□□□□ -1.8
RTCAO00442 NANOGP5-201ENST00000424456 877 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.8□□□□□ -1.8
RTCAO00442 RSL24D1P6-201ENST00000426934 401 ntBASIC3.8□□□□□ -1.8
RTCAO00442 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
RTCAO00442 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
RTCAO00442 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.8□□□□□ -1.8
RTCAO00442 USP9YP24-201ENST00000434374 697 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.8□□□□□ -1.8
RTCAO00442 Z80107.1-201ENST00000436830 412 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.8□□□□□ -1.8
RTCAO00442 TPTE2P3-201ENST00000441562 1189 ntBASIC3.8□□□□□ -1.8
RTCAO00442 USP9YP17-201ENST00000444617 696 ntBASIC3.8□□□□□ -1.8
RTCAO00442 MTND2P19-201ENST00000449129 1012 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AC112492.1-201ENST00000449607 712 ntBASIC3.8□□□□□ -1.8
RTCAO00442 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.8□□□□□ -1.8
RTCAO00442 SNORD11.1-201ENST00000459482 85 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms