Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.96□□□□□ -1.94
UPK1AO00322 RNU6-751P-201ENST00000516382 101 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 RN7SKP277-201ENST00000516895 283 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.96□□□□□ -1.94
UPK1AO00322 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 IGHV3-76-201ENST00000522465 295 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 OR8L1P-201ENST00000534005 955 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 OR6C73P-201ENST00000546432 358 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 AC055876.1-202ENST00000567053 138 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK1AO00322 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.96□□□□□ -1.94
UPK1AO00322 BX322635.1-201ENST00000605804 496 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC011374.2-201ENST00000607135 526 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC100793.4-201ENST00000613683 429 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC012314.7-201ENST00000619693 93 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AC022079.2-201ENST00000619739 566 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 AL162233.1-201ENST00000620014 944 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK1AO00322 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK1AO00322 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK1AO00322 ZNF90P1-201ENST00000480493 1951 ntBASIC2.96□□□□□ -1.94
UPK1AO00322 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UPK1AO00322 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.95□□□□□ -1.94
UPK1AO00322 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UPK1AO00322 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
UPK1AO00322 AL353743.1-202ENST00000431724 1695 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 RNU1-85P-201ENST00000364127 164 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 RPL31P1-201ENST00000398116 372 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 MTND2P16-201ENST00000419987 799 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.95□□□□□ -1.94
UPK1AO00322 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 RPL23AP69-201ENST00000431134 458 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 OR2B8P-201ENST00000432841 938 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 CKS1BP5-201ENST00000434172 273 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 XKRY2-201ENST00000442362 1093 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 BTF3P5-201ENST00000457252 467 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 AC093663.2-201ENST00000484625 313 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.95□□□□□ -1.94
UPK1AO00322 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 RN7SKP96-201ENST00000516948 297 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.95□□□□□ -1.94
UPK1AO00322 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.95□□□□□ -1.94
UPK1AO00322 ZNF192P1-203ENST00000565888 810 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 AC016877.3-201ENST00000606778 504 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 MIR4278-201ENST00000636094 69 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.95□□□□□ -1.94
UPK1AO00322 MTND5P3-201ENST00000438536 1800 ntBASIC2.95□□□□□ -1.94
UPK1AO00322 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
UPK1AO00322 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
UPK1AO00322 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
UPK1AO00322 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 OR1S2-201ENST00000302592 978 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 RNA5SP267-201ENST00000364893 126 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 RNU6-1293P-201ENST00000384077 107 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 MTND4P24-201ENST00000424002 397 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 OR51AB1P-201ENST00000429046 620 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1AO00322 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 BX276092.4-201ENST00000452056 248 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 PRSS3P4-201ENST00000453323 162 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC008494.2-201ENST00000514544 370 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC010306.1-201ENST00000523223 1117 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 AP004242.1-201ENST00000533701 349 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1AO00322 MTATP6P25-201ENST00000574491 261 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 AC006270.2-201ENST00000578523 652 ntBASIC2.94□□□□□ -1.94
UPK1AO00322 CCDC58P3-201ENST00000590792 430 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms